Gene detail

Detail information of MD01G1034500 Annotation

Gene ID	Annotation
MD01G1034500	Peroxidase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0088	extracellular region aspartic-type endopeptidase activity regulation of double fertilization forming a zygote and endosperm proteolysis

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD01G1034500	mRNA	Chr01	11727415	11729067	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP005805.1	1	-

Gene Ontology

GO term	Description	Category
GO:0020037	heme binding	molecular_function
GO:0055114	oxidation-reduction process	biological_process
GO:0006979	response to oxidative stress	biological_process
GO:0004601	peroxidase activity	molecular_function

KEGG

KO	Description	Enzyme
K00430	peroxidase	EC:1.11.1.7

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.639962
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	0
SRR5252886	dormant buds	no	dormant buds(1 months)	0.192684
SRR5252887	dormant buds	no	dormant buds(1 months)	0.102393
SRR5252884	dormant buds	no	dormant buds(2 months)	0.163521
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0.0908368
SRR5252878	bud break	no	bud break	2.44539
SRR5252879	bud break	no	bud break	7.23113
SRR3744766	flower	no	mature	0.935408
SRR3744767	flower	no	mature	0.911404
SRR3744768	flower	no	mature	0.76732
SRR6308190	stigmas	no	open flowers	4.26239
SRR6308181	styles	no	open flowers	5.10262
SRR6308188	filaments	no	open flowers	1.00199
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	1.5673
SRR6308194	sepals	no	open flowers	0.276222
SRR6308193	receptacles	no	open flowers	0.440521
SRR6308189	ovaries	no	open flowers	2.59411
SRR3384922	fruit	no	1 week after full bloom	1.61229
SRR3384921	fruit	no	2 week after full bloom	5.2356
SRR3384920	fruit	no	3 week after full bloom	6.00037
SRR3384919	fruit	no	4 week after full bloom	3.92098
SRR3384923	fruit	no	5 week after full bloom	1.47867
SRR3384918	fruit	no	6 week after full bloom	1.50293
SRR3384917	fruit	no	8 week after full bloom	1.85986
SRR3384916	fruit	no	10 week after full bloom	0.402686
SRR3384915	fruit	no	12 week after full bloom	0.158818
SRR3384914	fruit	no	14 week after full bloom	0.0770154
SRR3384913	fruit	no	16 week after full bloom	0.272134
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0.0816476
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	9.31473
SRR768129	whole fruit	no	35 days post anthesis	9.21618
SRR768130	whole fruit	no	60 days post anthesis	0.6792
SRR768131	whole fruit	no	87 days post anthesis	0.12781
SRR7343308	immature fruit flesh	no	immature	7.26278
SRR7343309	immature fruit flesh	no	immature	4.98536
SRR6320494	ripe fruit flesh	no	mature	1.29634
SRR5405143	ripe fruit peel	no	mature	0.508149
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.383114
SRR7403506	fruit	uninfected	mature	0.494638
SRR7403507	fruit	uninfected	mature	0.427127
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0.353093
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0.304911
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	29.0005
SRR1613974	Central seeds	no	20DAPF	25.0541
SRR1613975	Central seeds	no	20DAPF	24.771
SRR1613976	Lateral seeds	no	20DAPF	22.2135
SRR1613977	Lateral seeds	no	20DAPF	21.6555
SRR1613978	Lateral seeds	no	20DAPF	20.0787
SRR3744786	stem	no	mature	1.06945
SRR3744787	stem	no	mature	0.63517
SRR3744772	stem	no	mature	1.12621
SRX765691	seedling shoot apex	no	4-6 week old seedling	3.62395
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	3.35683
SRR1089478	leaf	Virus-free	plantlets	1.32368
SRR1089477	leaf	ASGV-infected	plantlets	1.82536
SRR767660	leaf	uninfected	fully developed	2.23666
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.25514
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.193538
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.449446
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	1.14091
SRR6308182	young leaf	no	immature leaves	0.554795
SRR3744769	leaf	no	mature	1.27299
SRR3744770	leaf	no	mature	1.07585
SRR3744771	leaf	no	mature	0.909431
SRR5405145	leaf	no	mature	0.52475
SRR6320561	leaf	no	mature	0.192187