Gene detail

Detail information of MD01G1073100 Annotation

Gene ID	Annotation
MD01G1073100	Uncharacterized conserved protein (DUF2358)

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD01G1073100	mRNA	Chr01	17820015	17822548	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT2G46220.1	1	Uncharacterized conserved protein (DUF2358)
Prunus persica	Prupe.2G179500.1.p	1	Uncharacterized conserved protein (DUF2358)
Pyrus communis	PCP029259.1	1	-
Pyrus x bretschneideri	Pbr021027.1	1	-
Rosa multiflora	Rmu_sc0002071.1_g000013.1	1	-
Rubus occidentalis	Ro07_G04396	1	-
Fragaria vesca	mrna18997.1	1	Uncharacterized conserved protein (DUF2358)
Vitis vinifera	GSVIVT01027017001	1	Uncharacterized conserved protein (DUF2358)
Populus trichocarpa	Potri.014G092200.1	1	Uncharacterized conserved protein (DUF2358)
Nicotiana benthamiana	Niben101Scf01756g01009.1	1	Uncharacterized conserved protein (DUF2358) LENGTH=241
Nicotiana benthamiana	Niben101Scf09433g01014.1	0.894	Uncharacterized conserved protein (DUF2358) LENGTH=241
Oryza sativa	LOC_Os01g12200.1	1	expressed protein
Oryza sativa	LOC_Os05g12474.1	1	expressed protein
Zea mays	GRMZM2G092981_P01	1	-

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	18.018
SRR5252888	dormant buds	no	dormant buds(0 month)	12.794
SRR5252889	dormant buds	no	dormant buds(0 month)	11.7521
SRR5252886	dormant buds	no	dormant buds(1 months)	15.103
SRR5252887	dormant buds	no	dormant buds(1 months)	11.2535
SRR5252884	dormant buds	no	dormant buds(2 months)	19.783
SRR5252882	dormant buds	no	dormant buds(3 months)	18.0248
SRR5252883	dormant buds	no	dormant buds(3 months)	19.6411
SRR5252880	dormant buds	no	dormant buds(4 months)	15.4788
SRR5252881	dormant buds	no	dormant buds(4 months)	18.7287
SRR5252878	bud break	no	bud break	17.9175
SRR5252879	bud break	no	bud break	8.54811
SRR3744766	flower	no	mature	18.0121
SRR3744767	flower	no	mature	15.7538
SRR3744768	flower	no	mature	15.333
SRR6308190	stigmas	no	open flowers	10.6045
SRR6308181	styles	no	open flowers	9.77751
SRR6308188	filaments	no	open flowers	5.13914
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	19.8558
SRR6308192	pollen	no	open flowers	161.769
SRR6308191	petals	no	open flowers	7.06967
SRR6308194	sepals	no	open flowers	7.443
SRR6308193	receptacles	no	open flowers	7.53704
SRR6308189	ovaries	no	open flowers	12.3998
SRR3384922	fruit	no	1 week after full bloom	8.3723
SRR3384921	fruit	no	2 week after full bloom	10.7617
SRR3384920	fruit	no	3 week after full bloom	14.8372
SRR3384919	fruit	no	4 week after full bloom	14.6289
SRR3384923	fruit	no	5 week after full bloom	15.6647
SRR3384918	fruit	no	6 week after full bloom	18.4136
SRR3384917	fruit	no	8 week after full bloom	27.6408
SRR3384916	fruit	no	10 week after full bloom	19.1545
SRR3384915	fruit	no	12 week after full bloom	19.6191
SRR3384914	fruit	no	14 week after full bloom	21.7179
SRR3384913	fruit	no	16 week after full bloom	10.2784
SRR3384912	fruit	no	18 week after full bloom	10.4435
SRR3384911	fruit	no	19 week after full bloom	10.3643
SRR3384910	fruit	no	20 week after full bloom	7.84267
SRR768128	whole fruit	no	25 days post anthesis	18.0096
SRR768129	whole fruit	no	35 days post anthesis	14.8545
SRR768130	whole fruit	no	60 days post anthesis	17.2307
SRR768131	whole fruit	no	87 days post anthesis	15.8034
SRR7343308	immature fruit flesh	no	immature	22.4215
SRR7343309	immature fruit flesh	no	immature	19.2935
SRR6320494	ripe fruit flesh	no	mature	10.3278
SRR5405143	ripe fruit peel	no	mature	10.3729
SRR6320572	ripe fruit peel	no	mature	4.14587
SRR7403504	fruit	uninfected	mature	10.125
SRR7403506	fruit	uninfected	mature	9.12381
SRR7403507	fruit	uninfected	mature	9.46747
SRR7403500	fruit	infected with penicillium expansum	mature	3.0952
SRR7403501	fruit	infected with penicillium expansum	mature	2.64457
SRR7403508	fruit	infected with penicillium expansum	mature	2.20747
SRR7403502	fruit	infected with penicillium expansum	mature	2.56004
SRR7403503	fruit	infected with penicillium expansum	mature	1.47301
SRR7403505	fruit	infected with penicillium expansum	mature	2.02502
SRR1613973	Central seeds	no	20DAPF	7.93045
SRR1613974	Central seeds	no	20DAPF	9.11638
SRR1613975	Central seeds	no	20DAPF	8.81468
SRR1613976	Lateral seeds	no	20DAPF	11.3844
SRR1613977	Lateral seeds	no	20DAPF	9.32804
SRR1613978	Lateral seeds	no	20DAPF	10.4089
SRR3744786	stem	no	mature	17.4748
SRR3744787	stem	no	mature	15.0793
SRR3744772	stem	no	mature	16.8002
SRX765691	seedling shoot apex	no	4-6 week old seedling	8.42924
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	6.51741
SRR1089478	leaf	Virus-free	plantlets	42.0433
SRR1089477	leaf	ASGV-infected	plantlets	61.6231
SRR767660	leaf	uninfected	fully developed	151.577
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	131.451
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	96.428
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	78.9221
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	68.4177
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	75.2461
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	41.502
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	85.6867
SRR6308182	young leaf	no	immature leaves	9.41435
SRR3744769	leaf	no	mature	30.4078
SRR3744770	leaf	no	mature	30.1144
SRR3744771	leaf	no	mature	27.0803
SRR5405145	leaf	no	mature	49.2084
SRR6320561	leaf	no	mature	49.5928