Detail information of MD01G1196300 Annotation
Gene IDAnnotation
MD01G1196300Integrase-type DNA-binding superfamily protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0012alpha-L-fucosidase [EC:3.2.1.51]
GH29

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD01G1196300mRNAChr012943890529439612-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Transcription Factors FamilyERF

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT5G52020.11Integrase-type DNA-binding superfamily protein
Prunus persicaPrupe.2G289600.1.p1Integrase-type DNA-binding superfamily protein
Pyrus communisPCP012285.11-
Pyrus x bretschneideriPbr032762.11-
Rosa multifloraRmu_sc0005594.1_g000003.11-
Rubus occidentalisRo07_G094881-
Fragaria vescamrna13327.11Integrase-type DNA-binding superfamily protein
Solanum lycopersicumSolyc08g080290.2.11Integrase-type DNA-binding superfamily protein
Solanum lycopersicumSolyc10g083560.1.11Integrase-type DNA-binding superfamily protein
Populus trichocarpaPotri.012G134000.11Integrase-type DNA-binding superfamily protein
Nicotiana benthamianaNiben101Scf16506g00004.11Ethylene-responsive transcription factor 1
Nicotiana benthamianaNiben101Scf08840g00003.10.839Ethylene-responsive transcription factor 1
Oryza sativaLOC_Os10g38000.11"dehydration-responsive element-binding protein, putative"
Oryza sativaLOC_Os02g45420.11"AP2 domain containing protein, expressed"
Zea maysGRMZM2G000520_P011Putative AP2/EREBP transcription factor superfamily protein

Gene Ontology
GO termDescriptionCategory
GO:0003700transcription factor activity, sequence-specific DNA bindingmolecular_function
GO:0003677DNA bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.16AP2701196.80E-09


Expression pattern
TOP