Detail information of MD01G1205000 Annotation
Gene IDAnnotation
MD01G1205000U-box domain-containing protein kinase family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD01G1205000mRNAChr013004188330046238+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Protein Kinases FamilyPPC:1.14.2
Ubiquitin FamilyU-box

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Prunus persicaPrupe.2G297400.1.p1U-box domain-containing protein kinase family protein
Pyrus x bretschneideriPbr031344.11-
Rosa multifloraRmu_sc0004824.1_g000003.11-
Rubus occidentalisRo07_G139741-
Fragaria vescamrna13236.11U-box domain-containing protein kinase family protein
Vitis viniferaGSVIVT010289090011U-box domain-containing protein kinase family protein
Solanum lycopersicumSolyc03g025450.2.11U-box domain-containing protein kinase family protein
Populus trichocarpaPotri.012G143100.11U-box domain-containing protein kinase family protein
Nicotiana benthamianaNiben101Scf06186g07005.11Receptor-like protein kinase
Nicotiana benthamianaNiben101Scf00595g03002.10.917Receptor-like protein kinase

Gene Ontology
GO termDescriptionCategory
GO:0004713protein tyrosine kinase activitymolecular_function
GO:0005524ATP bindingmolecular_function
GO:0006468protein phosphorylationbiological_process
GO:0004842ubiquitin-protein transferase activitymolecular_function
GO:0000151ubiquitin ligase complexcellular component
GO:0016567protein ubiquitinationbiological_process
GO:0006950response to stressbiological_process

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00582.22Usp191373.80E-05
PF07714.13Pkinase_Tyr4296774.00E-33
PF04564.11U-box7057715.10E-16


Expression pattern
Created with Highcharts 5.0.4Chart context menuExpression pattern for MD01G1205000.whole_seedling_SRR768136dormant_buds_0month_SRR5252888dormant_buds_0month_SRR5252889dormant_buds_1months_SRR5252886dormant_buds_1months_SRR5252887dormant_buds_2months_SRR5252884dormant_buds_3months_SRR5252882dormant_buds_3months_SRR5252883dormant_buds_4months_SRR5252880dormant_buds_4months_SRR5252881bud_break_SRR5252878bud_break_SRR5252879flower_SRR3744766flower_SRR3744767flower_SRR3744768stigmas_SRR6308190styles_SRR6308181filaments_SRR6308188anthers_SRR6308187pollen_SRR6308192petals_SRR6308191sepals_SRR6308194receptacles_SRR6308193ovaries_SRR6308189fruit_1WAFB_SRR3384922fruit_2WAFB_SRR3384921fruit_3WAFB_SRR3384920fruit_4WAFB_SRR3384919fruit_5WAFB_SRR3384923fruit_6WAFB_SRR3384918fruit_8WAFB_SRR3384917fruit_10WAFB_SRR3384916fruit_12WAFB_SRR3384915fruit_14WAFB_SRR3384914fruit_16WAFB_SRR3384913fruit_18WAFB_SRR3384912fruit_19WAFB_SRR3384911fruit_20WAFB_SRR3384910whole_fruit_25DPA_SRR768128whole_fruit_35DPA_SRR768129whole_fruit_60DPA_SRR768130whole_fruit_87DPA_SRR768131immature_fruit_flesh_SRR7343308immature_fruit_flesh_SRR7343309ripe_fruit_flesh_SRR6320494ripe_fruit_peel_SRR5405143ripe_fruit_peel_SRR6320572fruit_control_uninfected_SRR7403504fruit_control_uninfected_SRR7403506fruit_control_uninfected_SRR7403507fruit_PhleoR_penicillium_expansum_SRR7403500fruit_PhleoR_penicillium_expansum_SRR7403501fruit_PhleoR_penicillium_expansum_SRR7403508fruit_creA_penicillium_expansum_SRR7403502fruit_creA_penicillium_expansum_SRR7403503fruit_creA_penicillium_expansum_SRR7403505Central_seeds_SRR1613973Central_seeds_SRR1613974Central_seeds_SRR1613975Lateral_seeds_SRR1613976Lateral_seeds_SRR1613977Lateral_seeds_SRR1613978stem_SRR3744786stem_SRR3744787stem_SRR3744772seedling_shoot_apex_SRX765691tree_shoot_apex_SRX765683leaf_uninfected_SRR1089478leaf_ASGV_infected_SRR1089477leaf_uninfected_SRR767660leaf_2days_post_Venturia_inaequalis_SRR767669leaf_4days_post_Venturia_inaequalis_SRR767670leaf_6days_post_Venturia_inaequalis_SRR767671leaf_8days_post_Venturia_inaequalis_SRR767672leaf_10days_post_Venturia_inaequalis_SRR7676…leaf_10days_post_Venturia_inaequalis_SRR767673leaf_12days_post_Venturia_inaequalis_SRR7676…leaf_12days_post_Venturia_inaequalis_SRR767674leaf_14days_post_Venturia_inaequalis_SRR7681…leaf_14days_post_Venturia_inaequalis_SRR768127young_leaves_SRR6308182leaf_SRR3744769leaf_SRR3744770leaf_SRR3744771leaf_SRR5405145leaf_SRR63205610246810121416Highcharts.com
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