| Gene ID | Annotation |
|---|---|
| MD02G1004200 | ribosomal protein L5 |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0762 | cytosolic large ribosomal subunit tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] large subunit ribosomal protein L10Ae large subunit ribosomal protein L5e transcription initiation factor TFIIF subunit alpha tRNA (guanine-N7-)-methyltransferase activity 5S rRNA binding protein C-terminus binding acetate biosynthetic process from carbon monoxide ribosome assembly protein targeting to mitochondrion methanol oxidation RNA methylation adaxial/abaxial pattern specification tRNA modification cyclin-dependent protein serine/threonine kinase regulator activity structural constituent of ribosome RNA binding |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD02G1004200 | mRNA | Chr02 | 290249 | 293300 | - |
| CDS: |
| MD02G1004200 |
| Protein: |
| MD02G1004200 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT3G25520.1 | 1 | ATL5;OLI5;PGY3;RPL5A|ribosomal protein L5;OLIGOCELLULA 5;PIGGYBACK3;RIBOSOMAL PROTEIN L5 A |
| Arabidopsis thaliana | AT5G39740.2 | 1 | OLI7;RPL5B|OLIGOCELLULA 7;ribosomal protein L5 B |
| Arabidopsis thaliana | AT5G39740.1 | 1 | OLI7;RPL5B|OLIGOCELLULA 7;ribosomal protein L5 B |
| Pyrus communis | PCP022939.1 | 1 | - |
| Pyrus x bretschneideri | Pbr007390.2 | 1 | - |
| Rosa multiflora | Rmu_sc0008647.1_g000012.1 | 1 | - |
| Oryza sativa | LOC_Os01g67134.1 | 1 | "ribosomal L18p/L5e family protein, putative, expressed" |
| Zea mays | GRMZM2G163081_P01 | 1 | 60S ribosomal protein L5-1; |
| GO term | Description | Category |
|---|---|---|
| GO:0003735 | structural constituent of ribosome | molecular_function |
| GO:0008097 | 5S rRNA binding | molecular_function |
| GO:0005840 | ribosome | cellular component |
| GO:0006412 | translation | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| K02932 | large subunit ribosomal protein L5e | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14204.2 | Ribosomal_L18_c | 191 | 280 | 4.40E-35 |
 |