| Gene ID | Annotation |
|---|---|
| MD02G1009900 | homolog of yeast FIP1 [V] |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0802 | guanyl nucleotide binding G-protein beta/gamma-subunit complex binding G-protein coupled receptor binding extrinsic component of cytoplasmic side of plasma membrane adenylate cyclase-modulating G-protein coupled receptor signaling pathway regulation of root morphogenesis histone binding RNA binding response to mannitol signal transducer activity structural constituent of ribosome obsolete GTP catabolic process GTPase activity cytosolic small ribosomal subunit heterotrimeric G-protein complex mitochondrial ribosome small subunit ribosomal protein S18e large subunit ribosomal protein L47 small subunit ribosomal protein S15e H/ACA ribonucleoprotein complex subunit 3 response to glucose translation chromatin silencing by small RNA response to fructose gravitropism thigmotropism Cajal body RNA methylation response to sucrose |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD02G1009900 | mRNA | Chr02 | 651086 | 659187 | + |
| CDS: |
| MD02G1009900 |
| Protein: |
| MD02G1009900 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT5G58040.1 | 1 | ATFIP1[V];ATFIPS5;FIP1[V];FIPS5|homolog of yeast FIP1 [V]; |
| Prunus persica | Prupe.7G260100.3.p | 1 | homolog of yeast FIP1 [V] |
| Prunus persica | Prupe.7G260100.2.p | 1 | homolog of yeast FIP1 [V] |
| Prunus persica | Prupe.7G260100.1.p | 1 | homolog of yeast FIP1 [V] |
| Pyrus communis | PCP013383.1 | 1 | - |
| Pyrus x bretschneideri | Pbr007338.1 | 1 | - |
| Rosa multiflora | Rmu_ssc0000355.1_g000025.1 | 1 | - |
| Rubus occidentalis | Ro01_G05079 | 1 | - |
| Fragaria vesca | mrna10055.1 | 1 | homolog of yeast FIP1 [V] |
| Vitis vinifera | GSVIVT01023597001 | 1 | homolog of yeast FIP1 [V] |
| Solanum lycopersicum | Solyc07g005320.2.1 | 1 | homolog of yeast FIP1 [V] |
| Solanum lycopersicum | Solyc12g099280.1.1 | 1 | fip1 motif-containing protein |
| Populus trichocarpa | Potri.018G110100.1 | 1 | homolog of yeast FIP1 [V] |
| Populus trichocarpa | Potri.006G187400.1 | 0.63 | homolog of yeast FIP1 [V] |
| Nicotiana benthamiana | Niben101Scf11874g01016.1 | 1 | Pre-mRNA polyadenylation factor fip1 |
| Nicotiana benthamiana | Niben101Scf05250g00012.1 | 0.71 | Pre-mRNA polyadenylation factor fip1 |
| Oryza sativa | LOC_Os03g51520.2 | 1 | "fip1 motif family protein, expressed" |
| GO term | Description | Category |
|---|---|---|
| -- | -- | -- |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |