Detail information of MD02G1013200 Annotation
Gene IDAnnotation
MD02G1013200RING/U-box superfamily protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0284

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD02G1013200mRNAChr02842184844393+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT2G15580.11RING/U-box superfamily protein
Pyrus communisPCP013400.11-
Pyrus x bretschneideriPbr033826.11-
Rosa multifloraRmu_sc0004626.1_g000003.11-
Rubus occidentalisRo01_G051211-
Fragaria vescamrna30830.11RING/U-box superfamily protein
Vitis viniferaGSVIVT010128900011RING/U-box superfamily protein
Populus trichocarpaPotri.018G114500.11RING/U-box superfamily protein
Populus trichocarpaPotri.006G190300.10.612RING/U-box superfamily protein
Nicotiana benthamianaNiben101Scf12672g00008.11RING finger protein 150
Oryza sativaLOC_Os06g08250.11"zinc finger family protein, putative, expressed"
Oryza sativaLOC_Os02g55480.21"zinc finger, C3HC4 type domain containing protein, expressed"
Oryza sativaLOC_Os09g17610.11"RING finger protein, putative, expressed"
Oryza sativaLOC_Os12g04590.21"zinc finger, C3HC4 type domain containing protein, expressed"
Oryza sativaLOC_Os12g04660.10.957"zinc finger, C3HC4 type domain containing protein, expressed"
Zea maysGRMZM2G170413_P011-

Gene Ontology
GO termDescriptionCategory
GO:0008270zinc ion bindingmolecular_function
GO:0005515protein bindingmolecular_function

KEGG
KODescriptionEnzyme
------

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF13639.2zf-RING_21511944.20E-11


Expression pattern
TOP