Gene detail

Detail information of MD02G1020700 Annotation

Gene ID	Annotation
MD02G1020700	Inorganic H pyrophosphatase family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0548	E3 ubiquitin-protein ligase BAH [EC:2.3.2.27] alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8 1.5.1.9] saccharopine dehydrogenase (NADP+ inorganic pyrophosphatase [EC:3.6.1.1] hydrogen-translocating pyrophosphatase activity inorganic diphosphatase activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD02G1020700	mRNA	Chr02	1469475	1474025	+

Sequences

CDS:

MD02G1020700

GCATCCTCGTTCGCATTCTCTCTCTACAACTCCAAAGCCTCCTCTGTTTCTCTGTGTTTCCTCTTCTGGGCAAAGAAGCTATGGGGGCGACGATACTCCCAGATCTCTGGGCCGAGATTTTGATCCCGCTGTGTGCGGTGATCGGCATCGCCTTCTCCTTGGTCCAGTGGATGTACGTTTCGCAGGTCAAGCTCTCCCCCGGCGGCGGCCGGGACTCCAACTCCGGGAAAAATGGGCACAACGAGTACCTCATCGAGGAAGAAGAAGGCGGTAACGACCACAACGTCGTCCTCAAATGCGCCGAAATCCAAAACGCCATTTCAGAAGGAGCAACCTCGTTCCTCTTCACGGAATACAGATATGTAGGTGCTTTCATGGTTGCTTTTGCAATCTTGATCTTCCTTTTCCTTGGATCCGTCGAGGGATTTAGTACAAGTAGCCGTGCATGTACATATGACCAAACCAAGACGTGCAAACCAGCTCTCGCCACTGCCATCTTCAGCACCATTTCCTTTTTGCTTGGTGCTGTAACTTCAGTGGTTTCTGGATTCCTTGGGATGAAGATTGCTACTTACGCAAATGCCAGAACAACGTTGGAGGCAAGAAAAGGTGTTGGGAAGGCTTTTATTACTGCATTTAGATCAGGAGCTGTGATGGGCTTTCTCCTCGCTTCAAGTGGTCTGTTGGTTCTTTACATTGCTATCAATGTCTTCAAGTTGTACTACGGTGATGACTGGGGTGGTCTTTTCGAGGCTATAACTGGTTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGCAGGGTTGGTGGAGGCATCTATACCAAAGCTGCTGATGTTGGTGCAGATCTTGTCGGCAAGGTTGAAAGAAATATTCCCGAGGATGACCCAAGGAACCCAGCTGTGATAGCTGATAATGTTGGTGACAATGTTGGAGATATAGCTGGCATGGGATCTGATCTTTTTGGATCCTATGCTGAGTCATCGTGTGCTGCCCTTGTGGTTGCTTCCATTTCCTCATTTGGGATCAATCACGAGCTAACTGCAATGCTATATCCTCTCATTGTCAGTTCCATCGGCATCATTGTTTGTTTGCTCACTACCCTATTTGCAACCGATTTCTTTGAGATCAAGGCTGTAAAGGAAATTGAGCCAACATTGAAGAGGCAGCTCATAATCTCCACTGTACTCATGACCGTTGGAGTTGCGATTGCTACATGGATTTCCGTTCCATCTTCCTTCACAATCTTCAATTTCGGAACACAGAAAGTTGTGAAGAACTGGCAGCTATTCTTATGTGTCTGTGTTGGTTTGTGGGCTGGCCTTATCATTGGGTTTGTAACAGAGTATTATACAAGCAATGCGTACAGCCCTGTGCAAGATGTTGCTGATTCTTGCCGGACTGGAGCTGCGACCAATGTCATTTTTGGCCTTGCATTGGGATACAAATCCGTCATTATTCCTATTTTTGCCATTGCAGTCAGCATTTTTGTTAGTTTTAGCTTTGCAGCTATGTACGGGATTGCGGTAGCTGCCCTTGGAATGCTGAGCACCATTGCAACTGGATTAGCGATTGATGCATATGGTCCCATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCAGGCATGAGCCACAGAATAAGAGAGAGAACTGATGCTCTTGATGCTGCAGGAAACACCACTGCTGCTATTGGAAAGGGATTTGCAATTGGCTCTGCTGCTCTTGTGTCCCTTGCTCTATTTGGTGCCTTTGTCAGCCGTGCTGGTATCAAAACAGTTGATGTGTTGACCCCGAAAGTGATTATTGGTTTGTTAGTGGGCGCAATGCTTCCGTATTGGTTCTCTGCCATGACAATGAAGAGTGTGGGAAGTGCAGCTCTAAAGATGGTTGAGGAAGTGCGCCGGCAATTCAATACCATTCCCGGTCTCATGGAGGGCACTGCCAAGCCGGACTACGCTACATGTGTTAAGATTTCGACTGATGCTTCCATCAAGGAAATGATCCCGCCTGGTGCCCTTGTCATGCTTACACCGCTCATTGTTGGGATCTTTTTTGGTGTGGAAACTCTCGCTGGCGTTCTTGCTGGATCCCTTGTGTCCGGTGTACAGATTGCCATTTCTGCGTCCAACACGGGCGGTGCCTGGGATAATGCCAAGAAATACATTGAGGCTGGTGCGTCGGAGCATGCAAGGACCCTTGGTCCAAAAGGATCAGAATGCCACAAAGCTGCTGTCATCGGTGACACCATTGGAGACCCTCTCAAGGATACATCTGGACCATCGCTCAACATTCTCATCAAGCTCATGGCCGTTGAGTCTCTTGTGTTTGCTCCGTTCTTTGCCACACACGGTGGCCTGCTTTTCAAGATTTAAGTTGAAAACGGTGCAACAGAAACCCGGAAGTTGTTCCTCTCCGTTCATCTGCTGATCCTTCCTTCCAATCTCCTCCGCGAAATAATAGAAGATGGGACTCAAATTAGTAACCAACGGGAGAATTGACAGACAAATTTTTTCCTTTCTGAAGGAGGGTTTATGATGACGATGATAATGGTCGAACTTAGTAGAGTTTGGATTTTCTTCTGTAACTTTCATTATTCAGAACTGGTCATTGTCCATTTTCTTACATTGTACTAGATTAATGCATATCGCCTTTCGGTCTTCTGCGGTTTTGTGTTGTT

Protein:

Gene family

Gene family	Subfamily
Transporter family	H-PPase

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G15690.1	1	AtAVP1;ATAVP3;AtVHP1;AVP1;AVP-3;FUGU5;VHP1\|ARABIDOPSIS THALIANA V-PPASE 3;FUGU 5
Pyrus x bretschneideri	Pbr003094.1	1	-
Fragaria vesca	mrna30771.1	1	Inorganic H pyrophosphatase family protein
Populus trichocarpa	Potri.006G063000.1	1	Inorganic H pyrophosphatase family protein
Populus trichocarpa	Potri.018G122700.1	1	Inorganic H pyrophosphatase family protein
Populus trichocarpa	Potri.018G119500.1	1	Inorganic H pyrophosphatase family protein

Gene Ontology

GO term	Description	Category
GO:0015992	proton transport	biological_process
GO:0004427	inorganic diphosphatase activity	molecular_function
GO:0016020	membrane	cellular component
GO:0009678	hydrogen-translocating pyrophosphatase activity	molecular_function

KEGG

KO	Description	Enzyme
K01507	inorganic pyrophosphatase	EC:3.6.1.1

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	4.71534
SRR5252888	dormant buds	no	dormant buds(0 month)	1.16688
SRR5252889	dormant buds	no	dormant buds(0 month)	1.10915
SRR5252886	dormant buds	no	dormant buds(1 months)	1.14023
SRR5252887	dormant buds	no	dormant buds(1 months)	1.37341
SRR5252884	dormant buds	no	dormant buds(2 months)	1.09667
SRR5252882	dormant buds	no	dormant buds(3 months)	1.0352
SRR5252883	dormant buds	no	dormant buds(3 months)	0.528764
SRR5252880	dormant buds	no	dormant buds(4 months)	1.22685
SRR5252881	dormant buds	no	dormant buds(4 months)	0.895892
SRR5252878	bud break	no	bud break	1.86513
SRR5252879	bud break	no	bud break	3.77986
SRR3744766	flower	no	mature	238.61
SRR3744767	flower	no	mature	237.63
SRR3744768	flower	no	mature	242.216
SRR6308190	stigmas	no	open flowers	23.7051
SRR6308181	styles	no	open flowers	11.3647
SRR6308188	filaments	no	open flowers	5.6103
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	85.9583
SRR6308192	pollen	no	open flowers	118.674
SRR6308191	petals	no	open flowers	3.54435
SRR6308194	sepals	no	open flowers	5.26264
SRR6308193	receptacles	no	open flowers	4.77185
SRR6308189	ovaries	no	open flowers	8.26262
SRR3384922	fruit	no	1 week after full bloom	2.72547
SRR3384921	fruit	no	2 week after full bloom	4.58913
SRR3384920	fruit	no	3 week after full bloom	6.95596
SRR3384919	fruit	no	4 week after full bloom	2.55985
SRR3384923	fruit	no	5 week after full bloom	2.68798
SRR3384918	fruit	no	6 week after full bloom	2.96404
SRR3384917	fruit	no	8 week after full bloom	7.45823
SRR3384916	fruit	no	10 week after full bloom	9.76827
SRR3384915	fruit	no	12 week after full bloom	9.96031
SRR3384914	fruit	no	14 week after full bloom	9.50819
SRR3384913	fruit	no	16 week after full bloom	6.65503
SRR3384912	fruit	no	18 week after full bloom	9.06591
SRR3384911	fruit	no	19 week after full bloom	6.05449
SRR3384910	fruit	no	20 week after full bloom	10.8426
SRR768128	whole fruit	no	25 days post anthesis	9.34829
SRR768129	whole fruit	no	35 days post anthesis	4.13038
SRR768130	whole fruit	no	60 days post anthesis	12.9087
SRR768131	whole fruit	no	87 days post anthesis	11.1335
SRR7343308	immature fruit flesh	no	immature	43.6214
SRR7343309	immature fruit flesh	no	immature	42.258
SRR6320494	ripe fruit flesh	no	mature	10.6515
SRR5405143	ripe fruit peel	no	mature	19.1129
SRR6320572	ripe fruit peel	no	mature	15.575
SRR7403504	fruit	uninfected	mature	15.1531
SRR7403506	fruit	uninfected	mature	15.1889
SRR7403507	fruit	uninfected	mature	15.1412
SRR7403500	fruit	infected with penicillium expansum	mature	1.43601
SRR7403501	fruit	infected with penicillium expansum	mature	1.16237
SRR7403508	fruit	infected with penicillium expansum	mature	1.76899
SRR7403502	fruit	infected with penicillium expansum	mature	2.55541
SRR7403503	fruit	infected with penicillium expansum	mature	2.49239
SRR7403505	fruit	infected with penicillium expansum	mature	2.09582
SRR1613973	Central seeds	no	20DAPF	15.1037
SRR1613974	Central seeds	no	20DAPF	16.8293
SRR1613975	Central seeds	no	20DAPF	16.4471
SRR1613976	Lateral seeds	no	20DAPF	23.8689
SRR1613977	Lateral seeds	no	20DAPF	21.5558
SRR1613978	Lateral seeds	no	20DAPF	20.7544
SRR3744786	stem	no	mature	43.8847
SRR3744787	stem	no	mature	41.6483
SRR3744772	stem	no	mature	42.7109
SRX765691	seedling shoot apex	no	4-6 week old seedling	12.3581
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	12.1273
SRR1089478	leaf	Virus-free	plantlets	19.2123
SRR1089477	leaf	ASGV-infected	plantlets	17.6206
SRR767660	leaf	uninfected	fully developed	5.86683
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	2.43938
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.54887
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0.744197
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	7.10972
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	8.09593
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	7.47928
SRR6308182	young leaf	no	immature leaves	7.75752
SRR3744769	leaf	no	mature	123.892
SRR3744770	leaf	no	mature	130.328
SRR3744771	leaf	no	mature	134.414
SRR5405145	leaf	no	mature	12.867
SRR6320561	leaf	no	mature	5.75443