Gene detail

Detail information of MD02G1031400 Annotation

Gene ID	Annotation
MD02G1031400	Plant haem oxygenase (decyclizing) family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD02G1031400	mRNA	Chr02	2457972	2460770	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT2G26670.1	1	ATHO1;GUN2;HO1;HY1;HY6;TED4\|ARABIDOPSIS THALIANA HEME OXYGENASE 1;GENOMES UNCOUPLED 2;HEME OXYGENASE 1;HEME OXYGENASE 6;REVERSAL OF THE DET PHENOTYPE 4
Prunus persica	Prupe.7G243300.1.p	1	Plant haem oxygenase (decyclizing) family protein
Pyrus communis	PCP017283.1	1	-
Pyrus x bretschneideri	Pbr003172.1	1	-
Vitis vinifera	GSVIVT01015535001	1	Plant haem oxygenase (decyclizing) family protein
Solanum lycopersicum	Solyc12g009470.1.1	1	Plant haem oxygenase (decyclizing) family protein
Solanum lycopersicum	Solyc04g079290.2.1	1	heme oxygenase 2
Nicotiana benthamiana	Niben101Scf06347g04017.1	1	heme oxygenase 3 LENGTH=285
Oryza sativa	LOC_Os06g40080.1	1	"heme oxygenase 1, putative, expressed"
Zea mays	GRMZM2G101004_P01	1	Heme oxygenase 1;

Gene Ontology

GO term	Description	Category
GO:0004392	heme oxygenase (decyclizing) activity	molecular_function
GO:0006788	heme oxidation	biological_process

KEGG

KO	Description	Enzyme
K21480	"heme oxygenase (biliverdin-producing, ferredoxin)"	EC:1.14.15.20

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01126.16	Heme_oxygenase	113	278	1.50E-12

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	38.105
SRR5252888	dormant buds	no	dormant buds(0 month)	6.01805
SRR5252889	dormant buds	no	dormant buds(0 month)	5.08737
SRR5252886	dormant buds	no	dormant buds(1 months)	6.61166
SRR5252887	dormant buds	no	dormant buds(1 months)	4.7578
SRR5252884	dormant buds	no	dormant buds(2 months)	5.61098
SRR5252882	dormant buds	no	dormant buds(3 months)	6.44819
SRR5252883	dormant buds	no	dormant buds(3 months)	4.72685
SRR5252880	dormant buds	no	dormant buds(4 months)	5.26528
SRR5252881	dormant buds	no	dormant buds(4 months)	4.67539
SRR5252878	bud break	no	bud break	5.24437
SRR5252879	bud break	no	bud break	5.29851
SRR3744766	flower	no	mature	42.671
SRR3744767	flower	no	mature	41.4534
SRR3744768	flower	no	mature	39.4192
SRR6308190	stigmas	no	open flowers	22.7882
SRR6308181	styles	no	open flowers	14.956
SRR6308188	filaments	no	open flowers	5.2866
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	37.1741
SRR6308192	pollen	no	open flowers	16.9248
SRR6308191	petals	no	open flowers	12.5251
SRR6308194	sepals	no	open flowers	38.4073
SRR6308193	receptacles	no	open flowers	11.4266
SRR6308189	ovaries	no	open flowers	9.22104
SRR3384922	fruit	no	1 week after full bloom	20.6896
SRR3384921	fruit	no	2 week after full bloom	12.4748
SRR3384920	fruit	no	3 week after full bloom	11.8735
SRR3384919	fruit	no	4 week after full bloom	10.6794
SRR3384923	fruit	no	5 week after full bloom	15.6706
SRR3384918	fruit	no	6 week after full bloom	15.1937
SRR3384917	fruit	no	8 week after full bloom	14.4761
SRR3384916	fruit	no	10 week after full bloom	16.5029
SRR3384915	fruit	no	12 week after full bloom	15.1554
SRR3384914	fruit	no	14 week after full bloom	18.0567
SRR3384913	fruit	no	16 week after full bloom	23.213
SRR3384912	fruit	no	18 week after full bloom	23.7922
SRR3384911	fruit	no	19 week after full bloom	26.1462
SRR3384910	fruit	no	20 week after full bloom	31.393
SRR768128	whole fruit	no	25 days post anthesis	10.2365
SRR768129	whole fruit	no	35 days post anthesis	10.5885
SRR768130	whole fruit	no	60 days post anthesis	12.8889
SRR768131	whole fruit	no	87 days post anthesis	9.70157
SRR7343308	immature fruit flesh	no	immature	6.16053
SRR7343309	immature fruit flesh	no	immature	5.50063
SRR6320494	ripe fruit flesh	no	mature	31.933
SRR5405143	ripe fruit peel	no	mature	13.578
SRR6320572	ripe fruit peel	no	mature	14.2417
SRR7403504	fruit	uninfected	mature	29.523
SRR7403506	fruit	uninfected	mature	30.8005
SRR7403507	fruit	uninfected	mature	26.9788
SRR7403500	fruit	infected with penicillium expansum	mature	20.7886
SRR7403501	fruit	infected with penicillium expansum	mature	21.9688
SRR7403508	fruit	infected with penicillium expansum	mature	22.6606
SRR7403502	fruit	infected with penicillium expansum	mature	18.4969
SRR7403503	fruit	infected with penicillium expansum	mature	22.0417
SRR7403505	fruit	infected with penicillium expansum	mature	17.8511
SRR1613973	Central seeds	no	20DAPF	7.13848
SRR1613974	Central seeds	no	20DAPF	9.29118
SRR1613975	Central seeds	no	20DAPF	7.78845
SRR1613976	Lateral seeds	no	20DAPF	21.5895
SRR1613977	Lateral seeds	no	20DAPF	15.3219
SRR1613978	Lateral seeds	no	20DAPF	18.8194
SRR3744786	stem	no	mature	18.9202
SRR3744787	stem	no	mature	19.3192
SRR3744772	stem	no	mature	18.0471
SRX765691	seedling shoot apex	no	4-6 week old seedling	4.87943
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	9.32699
SRR1089478	leaf	Virus-free	plantlets	12.9712
SRR1089477	leaf	ASGV-infected	plantlets	14.1517
SRR767660	leaf	uninfected	fully developed	33.052
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	32.6561
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	37.4255
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	23.4906
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	14.7296
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	23.6538
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	30.732
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	22.3672
SRR6308182	young leaf	no	immature leaves	14.7943
SRR3744769	leaf	no	mature	16.5199
SRR3744770	leaf	no	mature	18.0464
SRR3744771	leaf	no	mature	18.1497
SRR5405145	leaf	no	mature	21.2194
SRR6320561	leaf	no	mature	35.0918