Gene detail

Detail information of MD02G1064900 Annotation

Gene ID	Annotation
MD02G1064900	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD02G1064900	mRNA	Chr02	5258537	5261632	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.7G221000.1.p	1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Pyrus communis	PCP004025.1	1	-
Pyrus x bretschneideri	Pbr015519.2	1	-
Rosa multiflora	Rmu_sc0000897.1_g000004.1	1	-
Rubus occidentalis	Ro01_G00804	1	-
Fragaria vesca	mrna11287.1	1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Vitis vinifera	GSVIVT01015310001	1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Solanum lycopersicum	Solyc05g018130.2.1	1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Populus trichocarpa	Potri.018G086900.1	1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Nicotiana benthamiana	Niben101Scf03885g08008.1	1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein LENGTH=329
Oryza sativa	LOC_Os01g09300.3	1	"oxidoreductase, putative, expressed"
Zea mays	GRMZM2G147882_P01	1	Iron ion binding protein;

Gene Ontology

GO term	Description	Category
GO:0055114	oxidation-reduction process	biological_process
GO:0005506	iron ion binding	molecular_function
GO:0016491	oxidoreductase activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03171.16	2OG-FeII_Oxy	186	287	9.80E-25

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	14.7029
SRR5252888	dormant buds	no	dormant buds(0 month)	6.39138
SRR5252889	dormant buds	no	dormant buds(0 month)	8.07717
SRR5252886	dormant buds	no	dormant buds(1 months)	6.72481
SRR5252887	dormant buds	no	dormant buds(1 months)	9.93629
SRR5252884	dormant buds	no	dormant buds(2 months)	7.23815
SRR5252882	dormant buds	no	dormant buds(3 months)	7.25947
SRR5252883	dormant buds	no	dormant buds(3 months)	6.84556
SRR5252880	dormant buds	no	dormant buds(4 months)	6.54837
SRR5252881	dormant buds	no	dormant buds(4 months)	5.48998
SRR5252878	bud break	no	bud break	5.13463
SRR5252879	bud break	no	bud break	4.84738
SRR3744766	flower	no	mature	12.4768
SRR3744767	flower	no	mature	14.4794
SRR3744768	flower	no	mature	13.4009
SRR6308190	stigmas	no	open flowers	27.1507
SRR6308181	styles	no	open flowers	26.9364
SRR6308188	filaments	no	open flowers	14.2631
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	7.64165
SRR6308192	pollen	no	open flowers	5.02476
SRR6308191	petals	no	open flowers	12.0569
SRR6308194	sepals	no	open flowers	26.2053
SRR6308193	receptacles	no	open flowers	14.5905
SRR6308189	ovaries	no	open flowers	18.4309
SRR3384922	fruit	no	1 week after full bloom	7.77681
SRR3384921	fruit	no	2 week after full bloom	7.56905
SRR3384920	fruit	no	3 week after full bloom	8.47099
SRR3384919	fruit	no	4 week after full bloom	6.90525
SRR3384923	fruit	no	5 week after full bloom	9.08412
SRR3384918	fruit	no	6 week after full bloom	10.9044
SRR3384917	fruit	no	8 week after full bloom	8.17943
SRR3384916	fruit	no	10 week after full bloom	9.08331
SRR3384915	fruit	no	12 week after full bloom	11.2204
SRR3384914	fruit	no	14 week after full bloom	10.8167
SRR3384913	fruit	no	16 week after full bloom	14.5933
SRR3384912	fruit	no	18 week after full bloom	12.9705
SRR3384911	fruit	no	19 week after full bloom	12.7877
SRR3384910	fruit	no	20 week after full bloom	14.7465
SRR768128	whole fruit	no	25 days post anthesis	9.4291
SRR768129	whole fruit	no	35 days post anthesis	10.3546
SRR768130	whole fruit	no	60 days post anthesis	12.2969
SRR768131	whole fruit	no	87 days post anthesis	14.2651
SRR7343308	immature fruit flesh	no	immature	9.26971
SRR7343309	immature fruit flesh	no	immature	9.63829
SRR6320494	ripe fruit flesh	no	mature	28.0082
SRR5405143	ripe fruit peel	no	mature	13.8183
SRR6320572	ripe fruit peel	no	mature	14.0202
SRR7403504	fruit	uninfected	mature	20.9212
SRR7403506	fruit	uninfected	mature	21.564
SRR7403507	fruit	uninfected	mature	19.3732
SRR7403500	fruit	infected with penicillium expansum	mature	36.7351
SRR7403501	fruit	infected with penicillium expansum	mature	29.3431
SRR7403508	fruit	infected with penicillium expansum	mature	34.4867
SRR7403502	fruit	infected with penicillium expansum	mature	31.1588
SRR7403503	fruit	infected with penicillium expansum	mature	27.6164
SRR7403505	fruit	infected with penicillium expansum	mature	25.7576
SRR1613973	Central seeds	no	20DAPF	4.28301
SRR1613974	Central seeds	no	20DAPF	4.30679
SRR1613975	Central seeds	no	20DAPF	3.61361
SRR1613976	Lateral seeds	no	20DAPF	4.18306
SRR1613977	Lateral seeds	no	20DAPF	3.8787
SRR1613978	Lateral seeds	no	20DAPF	3.95299
SRR3744786	stem	no	mature	10.5419
SRR3744787	stem	no	mature	8.78835
SRR3744772	stem	no	mature	10.4646
SRX765691	seedling shoot apex	no	4-6 week old seedling	6.87909
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	5.77012
SRR1089478	leaf	Virus-free	plantlets	12.7901
SRR1089477	leaf	ASGV-infected	plantlets	11.2829
SRR767660	leaf	uninfected	fully developed	12.5887
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	9.18173
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	9.63455
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	8.21393
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	1.58974
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	21.1499
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	14.782
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	11.6744
SRR6308182	young leaf	no	immature leaves	7.74637
SRR3744769	leaf	no	mature	10.9802
SRR3744770	leaf	no	mature	12.2626
SRR3744771	leaf	no	mature	11.6366
SRR5405145	leaf	no	mature	15.1966
SRR6320561	leaf	no	mature	11.157