Gene detail

Detail information of MD02G1074300 Annotation

Gene ID	Annotation
MD02G1074300	arginine methyltransferase 11

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD02G1074300	mRNA	Chr02	5963796	5966843	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Epigenetic Regulators	PRMT

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G29510.1	1	ATPRMT11;ATPRMT1B;PRMT11;PRMT1B\|ARABIDOPSIS THALIANA ARGININE METHYLTRANSFERASE 11;ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1B;arginine methyltransferase 11;PROTEIN ARGININE METHYLTRANSFERASE 1B
Prunus persica	Prupe.7G213600.1.p	1	arginine methyltransferase 11
Rubus occidentalis	Ro01_G00871	1	-
Fragaria vesca	mrna11395.1	1	arginine methyltransferase 11
Vitis vinifera	GSVIVT01015236001	1	arginine methyltransferase 11
Solanum lycopersicum	Solyc12g008760.1.1	1	arginine methyltransferase 11
Solanum lycopersicum	Solyc01g096550.2.1	1	protein arginine methyltransferase 3
Populus trichocarpa	Potri.018G067200.1	1	arginine methyltransferase 11
Nicotiana benthamiana	Niben101Scf02816g07009.1	1	arginine methyltransferase 11 LENGTH=390
Oryza sativa	LOC_Os09g19560.1	1	"methyltransferase, putative, expressed"
Zea mays	GRMZM2G003038_P01	1	Protein arginine N-methyltransferase 1;

Gene Ontology

GO term	Description	Category
GO:0006479	protein methylation	biological_process
GO:0008168	methyltransferase activity	molecular_function

KEGG

KO	Description	Enzyme
K11434	type I protein arginine methyltransferase	EC:2.1.1.319

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	20.9628
SRR5252888	dormant buds	no	dormant buds(0 month)	8.08818
SRR5252889	dormant buds	no	dormant buds(0 month)	6.85755
SRR5252886	dormant buds	no	dormant buds(1 months)	7.14742
SRR5252887	dormant buds	no	dormant buds(1 months)	8.07107
SRR5252884	dormant buds	no	dormant buds(2 months)	3.79103
SRR5252882	dormant buds	no	dormant buds(3 months)	5.44982
SRR5252883	dormant buds	no	dormant buds(3 months)	5.6623
SRR5252880	dormant buds	no	dormant buds(4 months)	8.22168
SRR5252881	dormant buds	no	dormant buds(4 months)	8.70454
SRR5252878	bud break	no	bud break	5.29138
SRR5252879	bud break	no	bud break	12.0844
SRR3744766	flower	no	mature	6.51408
SRR3744767	flower	no	mature	7.96196
SRR3744768	flower	no	mature	7.85045
SRR6308190	stigmas	no	open flowers	3.01201
SRR6308181	styles	no	open flowers	5.17854
SRR6308188	filaments	no	open flowers	14.0094
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	4.41289
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	12.5209
SRR6308194	sepals	no	open flowers	8.26929
SRR6308193	receptacles	no	open flowers	9.76336
SRR6308189	ovaries	no	open flowers	6.12386
SRR3384922	fruit	no	1 week after full bloom	11.9248
SRR3384921	fruit	no	2 week after full bloom	8.86214
SRR3384920	fruit	no	3 week after full bloom	5.93727
SRR3384919	fruit	no	4 week after full bloom	8.77625
SRR3384923	fruit	no	5 week after full bloom	6.95512
SRR3384918	fruit	no	6 week after full bloom	5.08792
SRR3384917	fruit	no	8 week after full bloom	4.87048
SRR3384916	fruit	no	10 week after full bloom	4.7713
SRR3384915	fruit	no	12 week after full bloom	4.29538
SRR3384914	fruit	no	14 week after full bloom	5.5347
SRR3384913	fruit	no	16 week after full bloom	3.43471
SRR3384912	fruit	no	18 week after full bloom	4.99941
SRR3384911	fruit	no	19 week after full bloom	3.65936
SRR3384910	fruit	no	20 week after full bloom	3.26037
SRR768128	whole fruit	no	25 days post anthesis	4.49622
SRR768129	whole fruit	no	35 days post anthesis	5.79962
SRR768130	whole fruit	no	60 days post anthesis	2.8908
SRR768131	whole fruit	no	87 days post anthesis	2.27484
SRR7343308	immature fruit flesh	no	immature	10.517
SRR7343309	immature fruit flesh	no	immature	12.5956
SRR6320494	ripe fruit flesh	no	mature	3.68394
SRR5405143	ripe fruit peel	no	mature	6.07101
SRR6320572	ripe fruit peel	no	mature	4.05959
SRR7403504	fruit	uninfected	mature	3.78674
SRR7403506	fruit	uninfected	mature	4.5219
SRR7403507	fruit	uninfected	mature	3.26269
SRR7403500	fruit	infected with penicillium expansum	mature	1.70209
SRR7403501	fruit	infected with penicillium expansum	mature	2.77845
SRR7403508	fruit	infected with penicillium expansum	mature	3.73279
SRR7403502	fruit	infected with penicillium expansum	mature	4.01223
SRR7403503	fruit	infected with penicillium expansum	mature	2.20136
SRR7403505	fruit	infected with penicillium expansum	mature	5.08824
SRR1613973	Central seeds	no	20DAPF	13.9917
SRR1613974	Central seeds	no	20DAPF	14.8018
SRR1613975	Central seeds	no	20DAPF	13.1662
SRR1613976	Lateral seeds	no	20DAPF	12.2351
SRR1613977	Lateral seeds	no	20DAPF	12.7675
SRR1613978	Lateral seeds	no	20DAPF	14.0429
SRR3744786	stem	no	mature	7.98801
SRR3744787	stem	no	mature	8.31004
SRR3744772	stem	no	mature	6.85734
SRX765691	seedling shoot apex	no	4-6 week old seedling	16.6507
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	10.0136
SRR1089478	leaf	Virus-free	plantlets	3.53191
SRR1089477	leaf	ASGV-infected	plantlets	3.80018
SRR767660	leaf	uninfected	fully developed	6.23971
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	14.1684
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	4.75768
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	1.49276
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	2.40386
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	7.50828
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	3.68343
SRR6308182	young leaf	no	immature leaves	19.9942
SRR3744769	leaf	no	mature	5.78463
SRR3744770	leaf	no	mature	5.3293
SRR3744771	leaf	no	mature	6.12068
SRR5405145	leaf	no	mature	4.46491
SRR6320561	leaf	no	mature	4.62465