Detail information of MD02G1154400 Annotation
Gene IDAnnotation
MD02G1154400geranylgeranyl pyrophosphate synthase 1

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD02G1154400mRNAChr021280767312808797+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT4G36810.11AtGGPPS11;AtLSU;GGPPS11;GGPS1;LSU|geranyl(geranyl)diphosphate synthase 11;geranylgeranyl pyrophosphate synthase 1;Large subunit of Heterodimeric geranyl(geranyl)diphosphate synthase
Prunus persicaPrupe.7G148600.1.p1geranylgeranyl pyrophosphate synthase 1
Pyrus communisPCP015604.11-
Pyrus x bretschneideriPbr022864.11-
Rosa multifloraRmu_sc0008034.1_g000005.11-
Rubus occidentalisRo01_G009811-
Fragaria vescamrna29522.11geranylgeranyl pyrophosphate synthase 1
Vitis viniferaGSVIVT010096540011geranylgeranyl pyrophosphate synthase 1
Solanum lycopersicumSolyc02g085700.1.11geranylgeranyl pyrophosphate synthase 1
Solanum lycopersicumSolyc09g008920.2.11geranylgeranyl reductase
Populus trichocarpaPotri.005G127100.11geranylgeranyl pyrophosphate synthase 1
Populus trichocarpaPotri.007G031100.10.632geranylgeranyl pyrophosphate synthase 1
Nicotiana benthamianaNiben101Scf00929g03016.11Geranylgeranyl diphosphate synthase
Nicotiana benthamianaNiben101Scf03110g02006.10.929Geranylgeranyl diphosphate synthase
Oryza sativaLOC_Os07g39270.11"polyprenyl synthetase, putative, expressed"
Zea maysGRMZM2G102550_P011Putative geranylgeranyl pyrophosphate synthase 2

Gene Ontology
GO termDescriptionCategory
GO:0008299isoprenoid biosynthetic processbiological_process

KEGG
KODescriptionEnzyme
K13789"geranylgeranyl diphosphate synthase, type II"EC:2.5.1.1 2.5.1.10 2.5.1.29

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00348.13polyprenyl_synt1123453.20E-56


Expression pattern
TOP