| Gene ID | Annotation |
|---|---|
| MD02G1214300 | transcription regulators |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| -- | -- | -- |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD02G1214300 | mRNA | Chr02 | 23803418 | 23829088 | + |
| CDS: |
| MD02G1214300 |
| Protein: |
| MD02G1214300 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G02080.2 | 1 | transcription regulators |
| Arabidopsis thaliana | AT1G02080.1 | 0.997 | transcription regulators |
| Pyrus communis | PCP031167.1 | 1 | - |
| Pyrus x bretschneideri | Pbr026400.1 | 1 | - |
| Rosa multiflora | Rmu_sc0001674.1_g000008.1 | 1 | - |
| Rubus occidentalis | Ro07_G17384 | 1 | - |
| Vitis vinifera | GSVIVT01018178001 | 1 | transcription regulators |
| Solanum lycopersicum | Solyc01g090780.2.1 | 1 | transcription regulators |
| Populus trichocarpa | Potri.002G143000.1 | 1 | transcription regulators |
| Populus trichocarpa | Potri.014G058800.1 | 0.613 | transcription regulators |
| Nicotiana benthamiana | Niben101Scf00397g02007.1 | 1 | CCR4-NOT transcription complex subunit 1 |
| Oryza sativa | LOC_Os03g01240.1 | 1 | "CCR4-Not complex component, Not1domain containing protein,expressed" |
| Oryza sativa | LOC_Os10g40780.3 | 1 | "CCR4-Not complex component, Not1domain containing protein,expressed" |
| GO term | Description | Category |
|---|---|---|
| -- | -- | -- |
| KO | Description | Enzyme |
|---|---|---|
| K12604 | CCR4-NOT transcription complex subunit 1 | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16418.1 | CNOT1_HEAT | 476 | 622 | 4.60E-36 |
| PF16417.1 | CNOT1_TTP_bind | 656 | 816 | 1.20E-68 |
| PF16415.1 | CNOT1_CAF1_bind | 949 | 1168 | 4.90E-92 |
| PF12842.3 | DUF3819 | 1287 | 1426 | 3.90E-52 |
 |