Gene detail

Detail information of MD02G1223300 Annotation

Gene ID	Annotation
MD02G1223300	ferredoxin-related

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0708	N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] chaperonin GroES N-acetyl-gamma-glutamyl-phosphate reductase activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD02G1223300	mRNA	Chr02	26072134	26074054	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G02180.1	1	ferredoxin-related
Pyrus x bretschneideri	Pbr012836.1	1	-
Fragaria vesca	mrna03063.1	1	ferredoxin-related
Vitis vinifera	GSVIVT01018345001	1	ferredoxin-related
Solanum lycopersicum	Solyc01g088620.2.1	1	ferredoxin-related
Populus trichocarpa	Potri.014G044500.1	1	ferredoxin-related
Nicotiana benthamiana	Niben101Scf10476g01003.1	1	ferredoxin-related LENGTH=226
Oryza sativa	LOC_Os02g58740.1	1	expressed protein
Zea mays	GRMZM2G073609_P01	1	ferredoxin-related

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.45695
SRR5252888	dormant buds	no	dormant buds(0 month)	0.261074
SRR5252889	dormant buds	no	dormant buds(0 month)	0.504066
SRR5252886	dormant buds	no	dormant buds(1 months)	0.221095
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0.187632
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0.18781
SRR5252881	dormant buds	no	dormant buds(4 months)	0.729613
SRR5252878	bud break	no	bud break	1.49651
SRR5252879	bud break	no	bud break	3.52637
SRR3744766	flower	no	mature	0.0798669
SRR3744767	flower	no	mature	0.035052
SRR3744768	flower	no	mature	0.106496
SRR6308190	stigmas	no	open flowers	0.295302
SRR6308181	styles	no	open flowers	0.380173
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0.157843
SRR6308193	receptacles	no	open flowers	0.377573
SRR6308189	ovaries	no	open flowers	0.306605
SRR3384922	fruit	no	1 week after full bloom	1.4977
SRR3384921	fruit	no	2 week after full bloom	3.24233
SRR3384920	fruit	no	3 week after full bloom	1.5954
SRR3384919	fruit	no	4 week after full bloom	1.55149
SRR3384923	fruit	no	5 week after full bloom	0.663954
SRR3384918	fruit	no	6 week after full bloom	0.656993
SRR3384917	fruit	no	8 week after full bloom	0.592831
SRR3384916	fruit	no	10 week after full bloom	0.616109
SRR3384915	fruit	no	12 week after full bloom	0.182243
SRR3384914	fruit	no	14 week after full bloom	0.17675
SRR3384913	fruit	no	16 week after full bloom	0.104091
SRR3384912	fruit	no	18 week after full bloom	0.0976841
SRR3384911	fruit	no	19 week after full bloom	0.0936905
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	3.27761
SRR768129	whole fruit	no	35 days post anthesis	4.99258
SRR768130	whole fruit	no	60 days post anthesis	1.55731
SRR768131	whole fruit	no	87 days post anthesis	0.439575
SRR7343308	immature fruit flesh	no	immature	0.521066
SRR7343309	immature fruit flesh	no	immature	0.52039
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0.0612248
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0.104764
SRR1613973	Central seeds	no	20DAPF	1.75284
SRR1613974	Central seeds	no	20DAPF	1.65358
SRR1613975	Central seeds	no	20DAPF	1.95217
SRR1613976	Lateral seeds	no	20DAPF	0.885543
SRR1613977	Lateral seeds	no	20DAPF	1.86152
SRR1613978	Lateral seeds	no	20DAPF	1.6871
SRR3744786	stem	no	mature	0.0821848
SRR3744787	stem	no	mature	0.162746
SRR3744772	stem	no	mature	0.284049
SRX765691	seedling shoot apex	no	4-6 week old seedling	4.87843
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	5.70973
SRR1089478	leaf	Virus-free	plantlets	3.36999
SRR1089477	leaf	ASGV-infected	plantlets	4.70532
SRR767660	leaf	uninfected	fully developed	8.71032
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	8.59346
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	2.20682
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.221427
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	3.85431
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	1.08908
SRR6308182	young leaf	no	immature leaves	4.6489
SRR3744769	leaf	no	mature	0.460811
SRR3744770	leaf	no	mature	0.354658
SRR3744771	leaf	no	mature	0.437498
SRR5405145	leaf	no	mature	0.90264
SRR6320561	leaf	no	mature	1.09946