Gene detail

Detail information of MD02G1303600 Annotation

Gene ID	Annotation
MD02G1303600	NAD(P)-binding Rossmann-fold superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD02G1303600	mRNA	Chr02	35736026	35736910	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.2G020800.1.p	1	NAD(P)-binding Rossmann-fold superfamily protein
Pyrus communis	PCP013800.1	1	-
Pyrus communis	PCP006389.1	0.669	-

Gene Ontology

GO term	Description	Category
GO:0050662	coenzyme binding	molecular_function
GO:0044237	cellular metabolic process	biological_process
GO:0003824	catalytic activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF16363.1	GDP_Man_Dehyd	11	70	1.50E-09

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	24.9893
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	2.00162
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	4.13893
SRR5252878	bud break	no	bud break	0
SRR5252879	bud break	no	bud break	0
SRR3744766	flower	no	mature	5.54387
SRR3744767	flower	no	mature	1.86656
SRR3744768	flower	no	mature	2.64533
SRR6308190	stigmas	no	open flowers	6.23079
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	8.90963
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	1.36213
SRR3384922	fruit	no	1 week after full bloom	0
SRR3384921	fruit	no	2 week after full bloom	0
SRR3384920	fruit	no	3 week after full bloom	0
SRR3384919	fruit	no	4 week after full bloom	0
SRR3384923	fruit	no	5 week after full bloom	1.47277
SRR3384918	fruit	no	6 week after full bloom	3.279
SRR3384917	fruit	no	8 week after full bloom	2.36701
SRR3384916	fruit	no	10 week after full bloom	0
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	1.8704
SRR3384910	fruit	no	20 week after full bloom	2.92895
SRR768128	whole fruit	no	25 days post anthesis	3.77435
SRR768129	whole fruit	no	35 days post anthesis	0
SRR768130	whole fruit	no	60 days post anthesis	0
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0.949
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	6.96567
SRR7403501	fruit	infected with penicillium expansum	mature	13.7825
SRR7403508	fruit	infected with penicillium expansum	mature	4.96786
SRR7403502	fruit	infected with penicillium expansum	mature	7.68175
SRR7403503	fruit	infected with penicillium expansum	mature	4.28995
SRR7403505	fruit	infected with penicillium expansum	mature	13.4965
SRR1613973	Central seeds	no	20DAPF	0.43417
SRR1613974	Central seeds	no	20DAPF	0.894855
SRR1613975	Central seeds	no	20DAPF	0
SRR1613976	Lateral seeds	no	20DAPF	0.638961
SRR1613977	Lateral seeds	no	20DAPF	0.247144
SRR1613978	Lateral seeds	no	20DAPF	0.378358
SRR3744786	stem	no	mature	3.85678
SRR3744787	stem	no	mature	3.82202
SRR3744772	stem	no	mature	0
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.267843
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.313489
SRR1089478	leaf	Virus-free	plantlets	13.9522
SRR1089477	leaf	ASGV-infected	plantlets	10.8226
SRR767660	leaf	uninfected	fully developed	8.27306
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.09228
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	58.628
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	14.1833
SRR6308182	young leaf	no	immature leaves	2.87803
SRR3744769	leaf	no	mature	15.9479
SRR3744770	leaf	no	mature	26.0452
SRR3744771	leaf	no	mature	33.7011
SRR5405145	leaf	no	mature	18.1018
SRR6320561	leaf	no	mature	26.8595