Gene detail

Detail information of MD03G1050900 Annotation

Gene ID	Annotation
MD03G1050900	cinnamate-4-hydroxylase

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD03G1050900	mRNA	Chr03	4046243	4050832	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Cytochrome P450 Family	CYP73A

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP002254.1	1	-

Gene Ontology

GO term	Description	Category
GO:0020037	heme binding	molecular_function
GO:0055114	oxidation-reduction process	biological_process
GO:0005506	iron ion binding	molecular_function
GO:0009055	electron carrier activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.18	p450	34	92	9.80E-11
PF00067.18	p450	92	474	8.90E-81

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	0.207145
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0.257781
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0
SRR5252878	bud break	no	bud break	0
SRR5252879	bud break	no	bud break	0.0710371
SRR3744766	flower	no	mature	0.02705
SRR3744767	flower	no	mature	0.023687
SRR3744768	flower	no	mature	0.0238483
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0.0877387
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.13594
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.112644
SRR6308194	sepals	no	open flowers	0.655058
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	0.0707427
SRR3384922	fruit	no	1 week after full bloom	0
SRR3384921	fruit	no	2 week after full bloom	0
SRR3384920	fruit	no	3 week after full bloom	0.23002
SRR3384919	fruit	no	4 week after full bloom	0.106252
SRR3384923	fruit	no	5 week after full bloom	0.151567
SRR3384918	fruit	no	6 week after full bloom	0.112484
SRR3384917	fruit	no	8 week after full bloom	0.0811989
SRR3384916	fruit	no	10 week after full bloom	0.052742
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0.0605228
SRR3384913	fruit	no	16 week after full bloom	0.142571
SRR3384912	fruit	no	18 week after full bloom	0.066898
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0.452141
SRR768128	whole fruit	no	25 days post anthesis	0
SRR768129	whole fruit	no	35 days post anthesis	0
SRR768130	whole fruit	no	60 days post anthesis	0.534476
SRR768131	whole fruit	no	87 days post anthesis	0.502881
SRR7343308	immature fruit flesh	no	immature	1.06959
SRR7343309	immature fruit flesh	no	immature	0.355835
SRR6320494	ripe fruit flesh	no	mature	0.340528
SRR5405143	ripe fruit peel	no	mature	0.199191
SRR6320572	ripe fruit peel	no	mature	0.294772
SRR7403504	fruit	uninfected	mature	0.0669699
SRR7403506	fruit	uninfected	mature	0.17686
SRR7403507	fruit	uninfected	mature	0.209991
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0.0925833
SRR7403502	fruit	infected with penicillium expansum	mature	0.0715803
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0.0719452
SRR1613974	Central seeds	no	20DAPF	0.185355
SRR1613975	Central seeds	no	20DAPF	0.134213
SRR1613976	Lateral seeds	no	20DAPF	0.185291
SRR1613977	Lateral seeds	no	20DAPF	0.0921457
SRR1613978	Lateral seeds	no	20DAPF	0.125393
SRR3744786	stem	no	mature	0.0278316
SRR3744787	stem	no	mature	0.0275395
SRR3744772	stem	no	mature	0
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.142738
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.162706
SRR1089478	leaf	Virus-free	plantlets	0.115849
SRR1089477	leaf	ASGV-infected	plantlets	0
SRR767660	leaf	uninfected	fully developed	0.352476
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	8.86337
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.46082
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	2.59675
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.299628
SRR6308182	young leaf	no	immature leaves	0.511799
SRR3744769	leaf	no	mature	0
SRR3744770	leaf	no	mature	0.0599154
SRR3744771	leaf	no	mature	0.0295161
SRR5405145	leaf	no	mature	0.619148
SRR6320561	leaf	no	mature	0.606697