Gene detail

Detail information of MD03G1136800 Annotation

Gene ID	Annotation
MD03G1136800	pleiotropic drug resistance 6

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0275	ATPase activity ATP binding positive regulation of cell communication regulation of meristem development plasmodesmata-mediated intercellular transport enzyme activator activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD03G1136800	mRNA	Chr03	13759342	13767151	-

Sequences

CDS:

MD03G1136800

GAAGGCAAGAATTTTCAAAGCATAAAATAATTAAAAAAATATTTGCGAAAGGTGGCTGTTTGCAGGTTCGCATGAACTTCCTCTGCTTTTTCTTCGTCGATGGCGCACTTTTTCTATAAAACCAAGACCAAAATCTCAACCCAGAAAATATCACCTCCCCCTCTTTCTTCTCCAAAAGCACTATTCTTTGAGTCTCACAGGAGTGGAAAAATACTTTCTTGGTGAAGAAAATAAAGGGTTGGAAATTTAAGTGTGTACATTTTGTGTGGATTGATTCAATTTTTGTTTTCTTAGGAGGGAAGAAAAGTAGTGAGTTCAATCGGTTTCTGGAATTGGGTCAGCCGGATTTGGCTGTTTGAATCAACCCATTTTCTGAAATATTGAGCTGAGGGGGATTTGTTTGGTTTTTCGAGCTAGCAACCATGTCTATAGCGACAGCGCTTGCCGGGGAGGACTTATCCCGGCAGACCAGCAGCCGGGGGAGCTGGCGGTCTGCGAGTGTGAGGGAGATGTGGAACGCGCCGGACGTTTTTCAGCGAAGCGGTCGGCAGCAGGTGTTAGATGAGGAGGAGGAGCTCAAGTGGGCGGCCATAGAGAGGCTGCCCACATATGATAGGATGAGGAGAGGGATGCTGAGGCAGGCCATGAGCAATGGGAGGGTTTTGACTGAAGAAATCGATACGGCGAATCTTGGGGAGCAAGATAAGAAGCAGTTGATGGAAAACATACTTAAGGTTGTGGAGGATGACAATGAAAAGTTCTTGCAGAGAATGAGAGCCAGAAATGAAAGGGTTGGGATTGATGTGCCTAAAGTTGAGGTTAGATTTGAGAAATTATCAATAGAGGGAGATGCATATGTTGGCAGCAGAGCACTTCCAACACTGCTAAATTCTTCCTTGAACATGATAGAGGGAATAATTGGAAAGCTTAAACTCGTACCATCAAAGAAAAGAAATGTTCAGATTCTCAAAGATGTGAGCGGCATCGTGAGGCCATCGAGGATGACACTGCTTCTGGGACCTCCTTCATCAGGAAAAACAACACTTTTAAAAGCGCTTGCGGGCAAACTTGATAAGGATCTAAGGGTAAGTGGAAAAGTGACCTACTGTGGCCATGAATTTGTGGAATTTGTGCCTCAGAGAACCTCTGCTTACATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACGTTGGACTTTTCCGGACGTTGCCTGGGAGTTGGAACCAGGTACGATATGCTGGTAGAGCTGTCTAGACGGGAGAAAGATTCTGGTATCAAACCAGACCCTGAAATCGATGCATTCATGAAAGCAACATCTTTGGCTGGCCAGGAGACGAGTTTGATCACAGATTACGTTCTCAAGATACTTGGATTAGATATTTGTGCTGATACCGTTGTTGGTGATGACATGAGAAGGGGCATATCTGGTGGACAAAAGAAACGCGTCACAACTGGAGAAATGTTGGTTGGACCAGCGAAAGCGTTCTTCATGGACGAAATTTCAACGGGGCTGGACAGTTCCACTACCTTTCAGATTGTCAAGTTCATGAGGCAGATGGTTCACATTCTGGATGTGACAATGGTCATCTCTCTTTTGCAGCCTGCACCAGAAACATATGATCTTTTTGATGACATTATCCTTATTTCTGAGGGTCAGATTGTGTACCAAGGCCCACGAGAGAATGTACTTGAATTCTTCGAATATATGGGGTTCAGATGCCCGGACAGAAAAGGTGTCGCAGATTTCTTGCAAGAAGTGACCTCAAAGAAGGATCAAGAACAATACTGGTTTAAGAAGAACGAACCATTCAGATATGTCTCTGTAGCTGATTTTGCACAGGCTTTCGCCACTTTTCATGTTGGCCAACGTCTTGCTGAGGACCTAAGAGTTCCGTATGATAAAAGAACAGCCCATCCTGCTGCCTTGGTGAAGGAAAAGTATGGAATAAGCAGTATGGAGCTTTTCAAGGCATGCTTTGCAAGGGAATGGTTGCTGATGAAGCGTAACTCATTTGTGTACATATTCAAGACTGTACAGATAGCAATCATGGCTACAATTACTTTCACTGTATTCTTCAGAACAGAAATGAAACCTGGGCAGTTAGGGGATTCGGCAAAATTCATGGGAGCATTGTTTTTCAGTCTCATTAACGTCATGTTTAATGGAGTGGCAGAGCTTTCAATGACAGTTTTCAGGCTTCCGGTGTTCTTTAAACAGAGGGATGCCTTATTCTACCCTGGATGGGCTTTTGCCTTGCCCATTTGGCTAACCAGAATTCCCATTTCGTTTATGGAATCTTTAATATGGATCTGTTTGACATACTATACCGTTGGGTTTGCACCTGAGCCCAGTAGGTTCTTCAAACAGCTCTTGGCTTACTTCGGTATACATCAAATGGCACTCGGACTCTTCCGTTTCATTGCTGGCCTTGGAAGATCAGAGATTCGAGCAAGCACTATTGGTTCCTTTGCATTGCTAATAGTGTTTGTCCTAGGAGGCTTTGTTGTTTCTAAAAATGACCTCGAGTCGTGGATGCTATGGACCTACTATATTTCACCTATGATGTATGGACAAAATGCAATTGCCATCAATGAATTTCTTGACAAAAGATGGAGCACTCCTGTCCTCAACGCCACTGAAAACACAGTTGGAAAGGTCCTTCTGGCGGGAAGAGGCCTGTTTACCACGGAGACTTGGTTTTGGATTTGTGTTGGGGCGCTTTTCGGGTTTTCTATTCTTTTTAATCTTCTCTTTGTTGCAGCATTGACCTTCTTAGACCCAATTGTTGATAATAAAACCTTAATCGCTACTGACGACTCTGAAAATAAGAGGAAGGGACAACCCAATCCAGAAGGTACTGATATGCAAGTGAGAAATCAAGCCAAAAAAGGAATGGTTTTACCCTTCGAGCCCCTTTCACTTGCTTTCAACCATGTGAACTACTATGTGGATATGCCTCCTGAAATGAAGAGCCAAGGGATTGAAGAGACTCGACTCCAACTTCTACGAGATGTTAGTGGTGCATTTAGGCCGGGTGTTCTGACTGCATTAGTTGGTGTCAGTGGTGCTGGAAAGACAACCTTGATGGATGTTTTAGCCGGAAGAAAGACTGGTGGGTATATTGAAGGAAGTATTACCATCTCTGGATACCCAAAGAACCAAGCCACATTTGCTCGGGTCAGCGGCTATTGTGAACAAAATGACATTCATTCACCATATGTTACTGTTTATGAATCTCTCGTATACTCTGCCTGGTTACGTCTTGCCAAGGATGTCACGAAGGATAAACGAAAGATGTTTGTTGATGAGGTCATAGATTTGGTTGAGCTTAATCCCTTGAGGAATGCTTTAGTTGGACTTCCAGGAGTTAATGGGCTTTCAACTGAGCAGAGAAAAAGGCTGACTATTGCTGTAGAATTGGTTGCTAATCCTTCCATCATCTTTATGGATGAACCGACATCAGGTCTTGATGCTAGAGCAGCTGCTATTGTTATGCGTACTGTTAGAAACACCGTGGATACCGGACGAACTGTTGTTTGCACTATTCACCAACCTAGCATTGACATTTTTGAGGCTTTTGATGAGCTGTTCCTAATGAAAAGAGGAGGACAAGTTATTTATGCTGGACCTCTAGGTGCCCGGTCTCACAAGCTTGTTGAATATTTTGAGGCTATTCCAGGGGTTCCGAAGATCAAAGATGGTTACAATCCTGCTACCTGGATGTTAGACGTCAGCTCAGCTGCCGTTGAGGCTCAAAATGACGTAGACTTTGCCGAAATATTTGCAAACTCTGATCTCTATAGGAGAAACCAGGAACTTATCAAGGAACTAAGCACGCCACAACCAGGCTCTAAGGATCTTCACTTCCCCACCCAATTTTCCCAAAGCTTTTTAACTCAGTGCCAAGCATGCTTCTGGAAACAGCATTGGTCATACTGGAGGAACTCGCAGTACAATGCCATTAGGTTTTTCATGACAATTTCCGTTGGAGTTATATTTGGTATTATCTTCTGGAACAAAGGAAAGAAAATGGATACACAACAAGACATCATGAATCTGTTGGGGGCAGGATATGCTGCTGTTCTTTTCCTTGGAGCGGGCAATGCTTCTGCTGTGCAATCGGTTGTTGCTGTTGAACGAACAGTTTTCTACCGTGAAAGAGCTGCTGGGATGTATTCTGAGTTGCCTTATGCATTTTCTCAGGTGGCTATTGAGACACTTTACGTTTTAATCCAAACCTTTGCGTATTCCGTTATTTTGTATGGCATGATTGGGTTCGATTGGAAGGTGGACAAATTTTTGTACTTCTACTATTTCATATTCATGTGCTTCACATATTTCTCCATGTACGGGATGATGGCAGTTGCCCTAACTCCTGGTCCCCAAATTGCTGCAATTGTTATGGGCTTCTTCATGAGCTTCTGGAACTTGTTCTCTGGTTTCCTCGTCCCACGAACGCTAATTCCCATCTGGTGGAGGTGGTACTACTGGGGTTCTCCAGTCGCCTGGACAATCTATGGCATCTTCGCATCTCAAATGGGCGATATTAAGAAGGTCATCGAAATTCCTGGTGAGAAACCCAAAGCAGTGAATCAGTTCCTTAAGGACTATTTGGGTTATGAAGAAGATTTTTTAATCGCCGTGGTGTTTGGTCATGTTGGTTGGGTCCTTCTCTTCTTCTTCATGTTTGCGTACGGCATCAAGTACCTTAACTTCCAAAGGAGATAAGCAACTTCACTCTGCAGAAATGTGAAATAGATCATCTACATAGATTCGTATGAGATACTCTAGTCAGTTAGCGATCACAAAAACATGTAAACTCGTTTTGTTGTTTGCCTTTTCGTTTGGATATTTTTATCATGTAATTTTTGTTTTGCTTCCATACATTTTCACCTTGAATTAATGTGTATAGTTACTTATTCTTCGAGTACTCAATAAAAGTTGTGCATTTTTT

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP016655.1	1	-
Pyrus x bretschneideri	Pbr004829.1	1	-

Gene Ontology

GO term	Description	Category
GO:0016887	ATPase activity	molecular_function
GO:0016020	membrane	cellular component
GO:0005524	ATP binding	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14510.2	ABC_trans_N	83	160	1.60E-14
PF00005.23	ABC_tran	182	364	1.70E-13
PF00005.23	ABC_tran	866	1018	5.10E-19

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	4.8124
SRR5252888	dormant buds	no	dormant buds(0 month)	77.3335
SRR5252889	dormant buds	no	dormant buds(0 month)	66.8798
SRR5252886	dormant buds	no	dormant buds(1 months)	92.0267
SRR5252887	dormant buds	no	dormant buds(1 months)	118.738
SRR5252884	dormant buds	no	dormant buds(2 months)	78.9015
SRR5252882	dormant buds	no	dormant buds(3 months)	59.6357
SRR5252883	dormant buds	no	dormant buds(3 months)	68.0916
SRR5252880	dormant buds	no	dormant buds(4 months)	43.4737
SRR5252881	dormant buds	no	dormant buds(4 months)	34.2388
SRR5252878	bud break	no	bud break	11.2423
SRR5252879	bud break	no	bud break	11.5787
SRR3744766	flower	no	mature	21.2187
SRR3744767	flower	no	mature	20.402
SRR3744768	flower	no	mature	20.8558
SRR6308190	stigmas	no	open flowers	19.3715
SRR6308181	styles	no	open flowers	26.6692
SRR6308188	filaments	no	open flowers	10.2293
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	13.6509
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	40.9907
SRR6308194	sepals	no	open flowers	27.2965
SRR6308193	receptacles	no	open flowers	11.8889
SRR6308189	ovaries	no	open flowers	19.4517
SRR3384922	fruit	no	1 week after full bloom	44.2461
SRR3384921	fruit	no	2 week after full bloom	63.4501
SRR3384920	fruit	no	3 week after full bloom	15.3445
SRR3384919	fruit	no	4 week after full bloom	14.9782
SRR3384923	fruit	no	5 week after full bloom	6.73408
SRR3384918	fruit	no	6 week after full bloom	5.10986
SRR3384917	fruit	no	8 week after full bloom	2.45206
SRR3384916	fruit	no	10 week after full bloom	3.21289
SRR3384915	fruit	no	12 week after full bloom	1.34838
SRR3384914	fruit	no	14 week after full bloom	3.356
SRR3384913	fruit	no	16 week after full bloom	6.6808
SRR3384912	fruit	no	18 week after full bloom	1.41066
SRR3384911	fruit	no	19 week after full bloom	3.85851
SRR3384910	fruit	no	20 week after full bloom	2.81185
SRR768128	whole fruit	no	25 days post anthesis	3.77362
SRR768129	whole fruit	no	35 days post anthesis	6.62206
SRR768130	whole fruit	no	60 days post anthesis	9.32192
SRR768131	whole fruit	no	87 days post anthesis	1.8133
SRR7343308	immature fruit flesh	no	immature	60.9848
SRR7343309	immature fruit flesh	no	immature	53.503
SRR6320494	ripe fruit flesh	no	mature	0.446647
SRR5405143	ripe fruit peel	no	mature	2.6277
SRR6320572	ripe fruit peel	no	mature	1.25022
SRR7403504	fruit	uninfected	mature	0.35835
SRR7403506	fruit	uninfected	mature	0.360079
SRR7403507	fruit	uninfected	mature	0.427533
SRR7403500	fruit	infected with penicillium expansum	mature	145.07
SRR7403501	fruit	infected with penicillium expansum	mature	134.459
SRR7403508	fruit	infected with penicillium expansum	mature	137.118
SRR7403502	fruit	infected with penicillium expansum	mature	151.508
SRR7403503	fruit	infected with penicillium expansum	mature	163.901
SRR7403505	fruit	infected with penicillium expansum	mature	157.888
SRR1613973	Central seeds	no	20DAPF	7.02531
SRR1613974	Central seeds	no	20DAPF	7.18642
SRR1613975	Central seeds	no	20DAPF	6.70223
SRR1613976	Lateral seeds	no	20DAPF	9.89525
SRR1613977	Lateral seeds	no	20DAPF	7.22832
SRR1613978	Lateral seeds	no	20DAPF	7.60862
SRR3744786	stem	no	mature	36.714
SRR3744787	stem	no	mature	37.8207
SRR3744772	stem	no	mature	39.5339
SRX765691	seedling shoot apex	no	4-6 week old seedling	31.1864
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	5.41486
SRR1089478	leaf	Virus-free	plantlets	126.291
SRR1089477	leaf	ASGV-infected	plantlets	63.4484
SRR767660	leaf	uninfected	fully developed	6.56253
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	12.5324
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	10.3608
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	21.4871
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	18.9942
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	46.8772
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	33.6092
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	52.0381
SRR6308182	young leaf	no	immature leaves	13.2609
SRR3744769	leaf	no	mature	37.4345
SRR3744770	leaf	no	mature	39.8448
SRR3744771	leaf	no	mature	40.2846
SRR5405145	leaf	no	mature	175.762
SRR6320561	leaf	no	mature	207.965