Gene detail

Detail information of MD03G1137000 Annotation

Gene ID	Annotation
MD03G1137000	pleiotropic drug resistance 6

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0275	ATPase activity ATP binding positive regulation of cell communication regulation of meristem development plasmodesmata-mediated intercellular transport enzyme activator activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD03G1137000	mRNA	Chr03	13790458	13798646	-

Sequences

CDS:

MD03G1137000

CCAGTTGGGCAGAGACGACTCACTCTCTCTCTCTCTCTCTTTCGGAGACTCTTCTTCTTTGTCCTGCTCAGACTTTGTTAGTCTATATAATGCTGAACCAAATCAATGGCAGAAATATCTCTTTCTCTCTCTCTCTCTCTCTCTCTTCACATTTTCTCACTCTTCACGAAAAACCAAGAAGCAAAGCAAAAAACCATTCTTTTGTTGATCGTCAATTTTCAACTCGAACATAGGAGTTCAATCGGTTTTTCTGAAACTGGGTTCGTCTGATTTGGTTGTGTTTGTCAAATCCAATACTTGAAATCTCGATTTTTGAGTGATTTGGTGGTTTGGGAGTTTAAAAAATGGCGGCTTTAGCCGGAGATGATCTATCTAGGCAGTCCAGTGTAGCCAGGCAGTCGAGCAGCCGGCGGAGCTGGCGGTCGACTAGTGTTCGGGAAATGTGGAACGCACCGGATGTGTTCCAGCGGAGCGGGCGGCAGCAGGCGGTGGATGAGGAGGAGGAGCTCAAGTGGGCCGCCATAGAGAGGCTGCCCACTTATGATAGGATGCGGAGGGGGATGCTGAGACAGGCCATGAGCAATGGGAGATTTGTAACTGAAGAAGTCGACGTTGCGAATCTTGGGGCGCAAGACAAGAAGCAGTTGATGGAGAGCATACTTAAGGTCGTGGAGGATGATAATGAAAGGTTCTTGCAGAGGCTCAGAGCCAGAAACGACAGGGTTGGAATTGAGGTTCCTAAGGTTGAGGTCAGATTCCAGAATTTGTCAATAGAAGGAGATGCTTATGTTGGCACCAGAGCACTTCCAACTCTGCTGAATTCCACCTTGAACCAACTTGAGGGACTAGTTGGATTGATTGGACTCTCAAAATCAAAGAAAAGAGTTGTCAAGATACTCCAAGATGTGAGCGGTATTGTTAAACCGTCAAGGATGACACTGCTTCTTGGACCTCCATCGTCAGGAAAAACAACACTGCTAAAAGCACTTGCTGGCAAACTCGATAAAGATCTAAGGGTAACTGGGAACGTGACCTATTGTGGCCATGAATTCCACGAATTTGTGCCTCAGAGAACTTCTGCTTATATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACATTGGATTTCTCCGGACGTTGCCTGGGAGTTGGAACCAGGTACGATATGCTGGTAGAGTTGTCTAGACGGGAGAAAGATTCAGGTATCAAACCCGATCCTGAAATCGACGCATTCATGAAAGCCACATCTATGGTTGGCCAGGAAACTAGTTTGATCACAGATTACGTTCTCAAGATACTTGGACTTGATATCTGTGCTGATATTATGGTGGGTGATGACATGAGAAGGGGCATATCCGGTGGACAGAAGAAACGTGTAACTACTGGAGAAATGTTGGTTGGACCAGCGAAAGCATTTTTCATGGATGAAATATCAACGGGGCTGGACAGTTCCACAACCTTTCAGATTGTCAAGTTCATGAGGCAGATGGTTCATATTATGGAAGTCTCAATGGTCATCTCTCTCTTGCAGCCTGCACCTGAGACGTATGATCTGTTTGACGACATTATGCTTCTTTCTGAGGGTCAGATTGTGTACCATGGTCCACGTGAAAATGTGCTTGAGTTCTTCGAATATATGGGGTTCAAATGCCCTGACAGAAAAGGTGTTGCAGACTTCTTGCAAGAAGTGACGTCTAAGAAGGACCAAGAACAATACTGGTTTAAGAAGAACCAACCCTACAGATTTGTTTCAGTATCCGATTTTGTTCGAGCATTCACCACTTTTCATGTTGGCCAACGTCTTGTGGAGGAACTAAGAGTTCCTTATGATAAAAGATCAGTCCATCCTGCTGCTCTGGTGACGGATAAGTATGGAATATCCAATATGGAGCTCTTCAAGGCATGCTTTGCAAGGGAATGGTTGCTGATGAAGCGTAACTCTTTCGTGTACGTATTCAAAACTACGCAGATAACAATCATGGCTACAATTGCTTTGACGGTATTCTTAAGAACAGAAATGAAAGCCGGAAGAGCAGAAGATTCGGCAAAATTCTGGGGAGCACTGTTTTTCAGTCTCATTAACGTCATGTTTAACGGAATGGCAGAGCTTGCAATGACAGTTTTCAGGATTCCTGTGTTCTTTAAACAAAGGGATGCCCTGTTCTATCCTGGCTGGGCTTTTGGCTTGCCCATTTCGCTAACCAGAATTCCCATTTCACTGATGGAATCTGGGATATGGATTGTTCTAACATACTACACCATCGGGTTTGCACCAGCGGCCAGTAGGTTCTTCAAACAGTTTTTGGCTTTCTTCGGCGTACATCAGATGGCACTCTCCCTTTTCCGTTTCATTGCTGCCCTTGGAAGAACAGAGGTTGTTTCGAATACAATTGGTTCCTTTACGTTGCTACTGGTGTTTGTCCTTGGAGGTTTCGTCGTCGCTAAAGATGACATCAAGCCGTGGATGATATGGGGCTACTATGCGTCACCTATGATGTATGGGCAAAATGCAATTGCTATCAATGAGTTTCTTGATAAAAGATGGAGTGCTCCTGTTCTCAATGCCTCTGAAAACACAGTTGGAAAGGTACTTCTGAGGGAAAGAGGACTGTTTACTACGGAGACTTGGTATTGGACTTGTATTGCCGCGCTCTTCGGATTTACTGTTCTCTTCAATATTCTTTTTATGGCAGCACTGACCTACTTAGATCCCCTAAGTGAAACTAAAACTCTAATTGAGAATGATGAAGACTCTGAAGGGAATAAGAAGCGACGATCCAGTCCAGAAGGTATTGATATGCAAGTCAGAAATTCTCAAGGAAATAATCAAGCCAAACGAGGAATGGTTTTACCCTTCCAGCCCCTCTCACTCGCTTTCAACCATGTGAATTACTATGTGGATATGCCTGCCGAAATGAAGAGCCAAGGGATTGAAGAGACTCGACTCCAACTTCTACGAGATGTCAGTGGTGCATTTAGACCTGGTGTTTTGACTGCATTAGTTGGTGTCAGTGGTGCTGGAAAGACAACCTTGATGGATGTCTTAGCTGGAAGAAAGACCGGTGGGTACATTGAAGGAAGTATTACCATCTCTGGTTACCCAAAGAACCAAGCCACATTTGCTCGGGTCAGCGGTTACTGTGAACAAAATGATATTCATTCACCATTTGTTACTGTCTATGAGTCTCTCCTATACTCTGCCTGGCTGCGTCTTGGTAAAGATGTCAAGACCGAAACAAGAAAGATGTTTGTTGATGAGGTTATGGATTTGGTCGAGCTTAACCCATTGAGAAATGCTTTAGTTGGACTTCCGGGAGTTGATGGACTTTCGACTGAGCAGAGAAAGAGGCTCACTATTGCTGTAGAATTGGTTGCCAACCCTTCCATCATCTTCATGGATGAGCCGACATCAGGACTTGATGCTAGAGCAGCCGCCATTGTTATGCGTACTGTAAGAAACACCGTGGATACAGGACGAACTGTTGTATGTACAATTCACCAGCCTAGCATTGACATTTTTGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGATTTATGCCGGTCCTCTAGGTCGCCAGTCTCACAAACTTGTTGAATACTTTGAGGCTATTCCAGGGGTTGCAAAGATCAAAGAGGGTTACAATCCAGCTACCTGGATGTTGGAGGTCAGCTCGGCTGCCATTGAGGCTCAGAATGATGTGGACTTTGCAGAAATATTTGCAAATTCTGATCTGTATAAGAGAAATCAAGAACTTATCAAGGAACTAAGTATTCCAGAACCAGGCTCCAGCGATCTTTACTTCCCCACCCAATACTCCCAAAGCTTTGCAACACAATGCAAGGCATGCTTCTGGAAACAACACTGGTCATACTGGAGGAACTCACGATACAATGCCATTAGGTTTTTCATGACAATCTGCATTGGAGTATTATTTGGTGTTATCTTCTGGGGCAAAGGAGACAAGATACACAAACAACAAGACCTGATCAATCTTTTGGGAGCTACCTATTCTGCCATTCTCTTCCTTGGAGCTAGCAATGCTTCTGCTGTGCAATCTGTGGTTGCGGTTGAACGAACGGTCTTCTATCGTGAAAGAGCAGCCGGAATGTATTCAGAGTTGCCTTATGCATTTGCTCAGGTGGCTATTGAGACAATTTACGTTGCAATCCAAACCTTCGTCTATTCTTGCCTTCTATTTTTCATGATCGGGTACAATTTCAAGGTGGAGAAGTTTTTGTACTTCTACTACTTCATCTTCATGTGCTTTACCTACTTCTCTATGTACGGAATGATGGTTGTTGCCCTGACTCCTGGCCATCAAATTGCTGCAATTGTTATGTCGTTCTTCTTGAGTTTCTGGAACTTGTTCTCGGGCTTCCTCATTCCCAGGCCGCTAATTCCCATCTGGTGGAGGTGGTACTACTGGGGTTCTCCCGTTGCCTGGACAATCTATGGTATCTTCACATCTCAAGTTGGTGACATGAAGACTAACATCGACATTCCTATTCAAGGACCACAAAAAATTGATGTATTTCTCAAAAACTACTTGGGTTTTGACTACGACTTTCTGATCCCTGTCGTCATTGCTCATCTTGGTTGGGTCCTCCTCTTCTTCTTCGTCTTTGCCTACGGCATCAAGTACCTTAACTTCCAAAGGAGATAAGGAATTTTACTGTACCTTCAAAATTGTTAAATAGATAGTCGAGTGTACAACATTACAGCCAAAGTTAGACAAAATTTGTCCTCTTTCTGTCTTGTTATTGTTATAGGTATCATACATTTTGTGTAATTTTGTTTGGCTTTGGATACATTTTCCAGATTACTTGTGTATAGCAATATTTATTCTTGAATATTGAATGTAAGAAGCTTTGTGATTTTTCTTAATATCGATGCGACAAATAAGAACTTATTCTACCGAAGAACTCGATGGAAACGGAACTTGAGCTGAACAAAGAAACAACAGAGCAACAGAGATTCTGATAAACTTGAGCTCTGAAGTTGCCAAAGGAATAGCAATATCAGCGGCTTCTTTATTTGTAAAATCAAACAATAATAATACACTTTAATTTTTTGACAAATCACATCATATCCAATATATGTTTCATAAGCTTGAGCTACTCTTGAGATTGCGACAAGAAAGTAGCATCAGCATTCTCATCATTGCAGTAGAGACAAGGGTGCTGCTCAAACCCTTGTTCTTTCAAAACTTGTCGCGCAAGCAACACGAGCTTTTTGTTGCTTAATTCAACCTCGTGATCCTTCAACACCATTTGGACCGCATTGCTGAATGCTCCACACGGCTTGCCACCAGTCATAACCGCGTTCGTTACATCCGCGGAAGTCTCATTTGCTTGACACCCGCTGAGTAGAATTCCTTCATCGGGCTTAGATGACTCGAACATGTCGAGGACTTCAAGCGGAGGCAAGCGAAACTTGAGGCTGGCGTCGGCTGCAAACAACTCTAGCAAGTGGGTTGCAATATCGGATGTGTTTATTCCCGTCAAGGATGAGAGGTGGTGCAATATGGTCTCGCAGGGAATGGCCTTCGGCTTGG

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.6G122100.1.p	1	pleiotropic drug resistance 6
Pyrus communis	PCP001323.1	1	-
Pyrus x bretschneideri	Pbr004830.2	1	-
Rosa multiflora	Rmu_sc0001694.1_g000015.1	1	-
Rubus occidentalis	Ro03_G06069	1	-
Vitis vinifera	GSVIVT01031378001	1	pleiotropic drug resistance 11
Vitis vinifera	GSVIVT01036184001	0.605	pleiotropic drug resistance 11

Gene Ontology

GO term	Description	Category
GO:0016887	ATPase activity	molecular_function
GO:0016020	membrane	cellular component
GO:0005524	ATP binding	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14510.2	ABC_trans_N	85	163	2.70E-16
PF00005.23	ABC_tran	185	367	1.70E-12
PF00005.23	ABC_tran	875	1027	6.50E-19

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	12.4038
SRR5252888	dormant buds	no	dormant buds(0 month)	118.75
SRR5252889	dormant buds	no	dormant buds(0 month)	101.407
SRR5252886	dormant buds	no	dormant buds(1 months)	92.5693
SRR5252887	dormant buds	no	dormant buds(1 months)	135.383
SRR5252884	dormant buds	no	dormant buds(2 months)	87.36
SRR5252882	dormant buds	no	dormant buds(3 months)	64.4053
SRR5252883	dormant buds	no	dormant buds(3 months)	88.7377
SRR5252880	dormant buds	no	dormant buds(4 months)	53.6581
SRR5252881	dormant buds	no	dormant buds(4 months)	49.3685
SRR5252878	bud break	no	bud break	43.8728
SRR5252879	bud break	no	bud break	49.6494
SRR3744766	flower	no	mature	41.391
SRR3744767	flower	no	mature	40.8022
SRR3744768	flower	no	mature	40.3703
SRR6308190	stigmas	no	open flowers	23.7649
SRR6308181	styles	no	open flowers	53.3912
SRR6308188	filaments	no	open flowers	18.1898
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	6.47992
SRR6308192	pollen	no	open flowers	1.26481
SRR6308191	petals	no	open flowers	81.4494
SRR6308194	sepals	no	open flowers	76.9468
SRR6308193	receptacles	no	open flowers	12.5573
SRR6308189	ovaries	no	open flowers	41.6687
SRR3384922	fruit	no	1 week after full bloom	25.0798
SRR3384921	fruit	no	2 week after full bloom	23.323
SRR3384920	fruit	no	3 week after full bloom	10.8581
SRR3384919	fruit	no	4 week after full bloom	20.8587
SRR3384923	fruit	no	5 week after full bloom	12.9642
SRR3384918	fruit	no	6 week after full bloom	11.4754
SRR3384917	fruit	no	8 week after full bloom	5.50379
SRR3384916	fruit	no	10 week after full bloom	7.78218
SRR3384915	fruit	no	12 week after full bloom	9.00638
SRR3384914	fruit	no	14 week after full bloom	8.00931
SRR3384913	fruit	no	16 week after full bloom	12.8685
SRR3384912	fruit	no	18 week after full bloom	12.5083
SRR3384911	fruit	no	19 week after full bloom	15.9762
SRR3384910	fruit	no	20 week after full bloom	18.6939
SRR768128	whole fruit	no	25 days post anthesis	9.7082
SRR768129	whole fruit	no	35 days post anthesis	16.5634
SRR768130	whole fruit	no	60 days post anthesis	13.2047
SRR768131	whole fruit	no	87 days post anthesis	28.5143
SRR7343308	immature fruit flesh	no	immature	83.6346
SRR7343309	immature fruit flesh	no	immature	77.4903
SRR6320494	ripe fruit flesh	no	mature	2.05751
SRR5405143	ripe fruit peel	no	mature	19.7981
SRR6320572	ripe fruit peel	no	mature	15.5122
SRR7403504	fruit	uninfected	mature	7.05228
SRR7403506	fruit	uninfected	mature	7.26162
SRR7403507	fruit	uninfected	mature	7.27234
SRR7403500	fruit	infected with penicillium expansum	mature	195.935
SRR7403501	fruit	infected with penicillium expansum	mature	179.511
SRR7403508	fruit	infected with penicillium expansum	mature	185.358
SRR7403502	fruit	infected with penicillium expansum	mature	178.176
SRR7403503	fruit	infected with penicillium expansum	mature	184.703
SRR7403505	fruit	infected with penicillium expansum	mature	184.517
SRR1613973	Central seeds	no	20DAPF	3.71474
SRR1613974	Central seeds	no	20DAPF	4.14934
SRR1613975	Central seeds	no	20DAPF	3.91261
SRR1613976	Lateral seeds	no	20DAPF	4.55168
SRR1613977	Lateral seeds	no	20DAPF	3.31915
SRR1613978	Lateral seeds	no	20DAPF	3.70279
SRR3744786	stem	no	mature	105.281
SRR3744787	stem	no	mature	103.13
SRR3744772	stem	no	mature	112.834
SRX765691	seedling shoot apex	no	4-6 week old seedling	36.721
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	11.1967
SRR1089478	leaf	Virus-free	plantlets	167.58
SRR1089477	leaf	ASGV-infected	plantlets	94.0986
SRR767660	leaf	uninfected	fully developed	23.1723
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	37.7465
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	29.4513
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	78.6052
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	25.4171
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	61.9989
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	54.8698
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	111.436
SRR6308182	young leaf	no	immature leaves	14.1367
SRR3744769	leaf	no	mature	60.2812
SRR3744770	leaf	no	mature	66.3861
SRR3744771	leaf	no	mature	67.3085
SRR5405145	leaf	no	mature	222.034
SRR6320561	leaf	no	mature	254.166