Gene detail

Detail information of MD03G1137800 Annotation

Gene ID	Annotation
MD03G1137800	CBL-interacting protein kinase 23

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0118	response to nutrient potassium ion import stomatal movement calcium-mediated signaling ERO1-like protein alpha [EC:1.8.4.-] CE8 enzyme inhibitor activity cellular response to water deprivation UDP-glucuronate decarboxylase [EC:4.1.1.35] cell wall modification galactolipid biosynthetic process plastid dTDP-glucose 4 pectinesterase activity cellular response to phosphate starvation regulation of meristem growth intracellular signal transduction dTDP-rhamnose biosynthetic process abscisic acid-activated signaling pathway cytokinesis by cell plate formation response to ethylene ER-nucleus signaling pathway

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD03G1137800	mRNA	Chr03	13964265	13965879	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP015952.1	1	-
Rosa multiflora	Rmu_co8374009.1_g000001.1	1	-
Solanum lycopersicum	Solyc12g077370.1.1	1	CBL-interacting protein kinase 5
Nicotiana benthamiana	Niben101Scf07267g02005.1	1	CBL-interacting protein kinase 2
Oryza sativa	LOC_Os04g08170.1	1	"CBL-interacting protein kinase, putative"
Oryza sativa	LOC_Os08g19410.1	1	"CBL-interacting protein kinase, putative"
Oryza sativa	LOC_Os11g05630.1	1	"CBL-interacting protein kinase, putative"

Gene Ontology

GO term	Description	Category
GO:0007165	signal transduction	biological_process

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03822.10	NAF	1	58	5.20E-22

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.517766
SRR5252888	dormant buds	no	dormant buds(0 month)	1.55953
SRR5252889	dormant buds	no	dormant buds(0 month)	0.401474
SRR5252886	dormant buds	no	dormant buds(1 months)	0.440239
SRR5252887	dormant buds	no	dormant buds(1 months)	0.467887
SRR5252884	dormant buds	no	dormant buds(2 months)	2.24165
SRR5252882	dormant buds	no	dormant buds(3 months)	0.374709
SRR5252883	dormant buds	no	dormant buds(3 months)	0.612463
SRR5252880	dormant buds	no	dormant buds(4 months)	0.747924
SRR5252881	dormant buds	no	dormant buds(4 months)	0.830164
SRR5252878	bud break	no	bud break	0.744954
SRR5252879	bud break	no	bud break	0.826073
SRR3744766	flower	no	mature	10.6289
SRR3744767	flower	no	mature	11.8088
SRR3744768	flower	no	mature	10.2407
SRR6308190	stigmas	no	open flowers	66.2854
SRR6308181	styles	no	open flowers	70.5375
SRR6308188	filaments	no	open flowers	11.8675
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	29.5092
SRR6308192	pollen	no	open flowers	131.143
SRR6308191	petals	no	open flowers	14.1467
SRR6308194	sepals	no	open flowers	5.79342
SRR6308193	receptacles	no	open flowers	13.3662
SRR6308189	ovaries	no	open flowers	29.5479
SRR3384922	fruit	no	1 week after full bloom	1.75482
SRR3384921	fruit	no	2 week after full bloom	5.1286
SRR3384920	fruit	no	3 week after full bloom	5.18483
SRR3384919	fruit	no	4 week after full bloom	3.86292
SRR3384923	fruit	no	5 week after full bloom	8.96359
SRR3384918	fruit	no	6 week after full bloom	5.72526
SRR3384917	fruit	no	8 week after full bloom	6.61265
SRR3384916	fruit	no	10 week after full bloom	8.89717
SRR3384915	fruit	no	12 week after full bloom	5.26352
SRR3384914	fruit	no	14 week after full bloom	5.10486
SRR3384913	fruit	no	16 week after full bloom	6.84201
SRR3384912	fruit	no	18 week after full bloom	5.25344
SRR3384911	fruit	no	19 week after full bloom	5.22528
SRR3384910	fruit	no	20 week after full bloom	7.30581
SRR768128	whole fruit	no	25 days post anthesis	2.30001
SRR768129	whole fruit	no	35 days post anthesis	5.74035
SRR768130	whole fruit	no	60 days post anthesis	9.23928
SRR768131	whole fruit	no	87 days post anthesis	10.142
SRR7343308	immature fruit flesh	no	immature	4.16317
SRR7343309	immature fruit flesh	no	immature	6.24936
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	1.76741
SRR6320572	ripe fruit peel	no	mature	0.819437
SRR7403504	fruit	uninfected	mature	6.57766
SRR7403506	fruit	uninfected	mature	5.00689
SRR7403507	fruit	uninfected	mature	6.55145
SRR7403500	fruit	infected with penicillium expansum	mature	16.5003
SRR7403501	fruit	infected with penicillium expansum	mature	13.727
SRR7403508	fruit	infected with penicillium expansum	mature	11.5004
SRR7403502	fruit	infected with penicillium expansum	mature	13.2339
SRR7403503	fruit	infected with penicillium expansum	mature	15.705
SRR7403505	fruit	infected with penicillium expansum	mature	13.9093
SRR1613973	Central seeds	no	20DAPF	7.46499
SRR1613974	Central seeds	no	20DAPF	5.09326
SRR1613975	Central seeds	no	20DAPF	5.90647
SRR1613976	Lateral seeds	no	20DAPF	6.21284
SRR1613977	Lateral seeds	no	20DAPF	6.21281
SRR1613978	Lateral seeds	no	20DAPF	6.55024
SRR3744786	stem	no	mature	6.70081
SRR3744787	stem	no	mature	5.55389
SRR3744772	stem	no	mature	6.96551
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.09128
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.62199
SRR1089478	leaf	Virus-free	plantlets	0
SRR1089477	leaf	ASGV-infected	plantlets	0.514337
SRR767660	leaf	uninfected	fully developed	3.01903
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	3.56448
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	4.33688
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	3.01845
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.498164
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	2.44581
SRR3744769	leaf	no	mature	3.86636
SRR3744770	leaf	no	mature	4.33341
SRR3744771	leaf	no	mature	5.12306
SRR5405145	leaf	no	mature	11.3302
SRR6320561	leaf	no	mature	5.56872