Gene detail

Detail information of MD03G1165900 Annotation

Gene ID	Annotation
MD03G1165900	UDP-Glycosyltransferase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD03G1165900	mRNA	Chr03	22079459	22080955	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT4

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT3G10630.1	1	UDP-Glycosyltransferase superfamily protein
Prunus persica	Prupe.4G266300.1.p	1	UDP-Glycosyltransferase superfamily protein
Pyrus communis	PCP014101.1	1	-
Pyrus x bretschneideri	Pbr027663.1	1	-
Rosa multiflora	Rmu_sc0008128.1_g000008.1	1	-
Rubus occidentalis	Ro07_G27184	1	-
Fragaria vesca	mrna29197.1	1	UDP-Glycosyltransferase superfamily protein
Vitis vinifera	GSVIVT01034635001	1	UDP-Glycosyltransferase superfamily protein
Populus trichocarpa	Potri.008G018200.1	1	UDP-Glycosyltransferase superfamily protein
Nicotiana benthamiana	Niben101Scf08230g00002.1	1	glycosyl transferase family 2 [Paenibacillus sp. OSY-SE]
Nicotiana benthamiana	Niben101Scf03522g00006.1	0.629	glycosyl transferase family 2 [Paenibacillus sp. OSY-SE]
Oryza sativa	LOC_Os09g12530.1	1	"glycosyl transferase, group 1 domain containing protein, expressed"

Gene Ontology

GO term	Description	Category
GO:0009058	biosynthetic process	biological_process

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	2.28237
SRR5252888	dormant buds	no	dormant buds(0 month)	2.07048
SRR5252889	dormant buds	no	dormant buds(0 month)	2.86493
SRR5252886	dormant buds	no	dormant buds(1 months)	3.65297
SRR5252887	dormant buds	no	dormant buds(1 months)	2.17414
SRR5252884	dormant buds	no	dormant buds(2 months)	2.35607
SRR5252882	dormant buds	no	dormant buds(3 months)	2.73611
SRR5252883	dormant buds	no	dormant buds(3 months)	1.01641
SRR5252880	dormant buds	no	dormant buds(4 months)	4.59247
SRR5252881	dormant buds	no	dormant buds(4 months)	3.9953
SRR5252878	bud break	no	bud break	4.8215
SRR5252879	bud break	no	bud break	5.14088
SRR3744766	flower	no	mature	0.469425
SRR3744767	flower	no	mature	0.433824
SRR3744768	flower	no	mature	0.666367
SRR6308190	stigmas	no	open flowers	0.985584
SRR6308181	styles	no	open flowers	0.508386
SRR6308188	filaments	no	open flowers	1.52797
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.525114
SRR6308192	pollen	no	open flowers	1.49487
SRR6308191	petals	no	open flowers	0.435102
SRR6308194	sepals	no	open flowers	0.948832
SRR6308193	receptacles	no	open flowers	0.672599
SRR6308189	ovaries	no	open flowers	1.29801
SRR3384922	fruit	no	1 week after full bloom	1.28078
SRR3384921	fruit	no	2 week after full bloom	1.57542
SRR3384920	fruit	no	3 week after full bloom	0.776821
SRR3384919	fruit	no	4 week after full bloom	0.820192
SRR3384923	fruit	no	5 week after full bloom	0.633747
SRR3384918	fruit	no	6 week after full bloom	0.976833
SRR3384917	fruit	no	8 week after full bloom	0.940197
SRR3384916	fruit	no	10 week after full bloom	1.37407
SRR3384915	fruit	no	12 week after full bloom	1.08386
SRR3384914	fruit	no	14 week after full bloom	0.70079
SRR3384913	fruit	no	16 week after full bloom	0.756629
SRR3384912	fruit	no	18 week after full bloom	0.710057
SRR3384911	fruit	no	19 week after full bloom	0.619116
SRR3384910	fruit	no	20 week after full bloom	0.678651
SRR768128	whole fruit	no	25 days post anthesis	2.38134
SRR768129	whole fruit	no	35 days post anthesis	3.46111
SRR768130	whole fruit	no	60 days post anthesis	1.93429
SRR768131	whole fruit	no	87 days post anthesis	2.13541
SRR7343308	immature fruit flesh	no	immature	1.37598
SRR7343309	immature fruit flesh	no	immature	1.37324
SRR6320494	ripe fruit flesh	no	mature	0.657397
SRR5405143	ripe fruit peel	no	mature	2.11358
SRR6320572	ripe fruit peel	no	mature	1.13868
SRR7403504	fruit	uninfected	mature	1.22794
SRR7403506	fruit	uninfected	mature	1.12646
SRR7403507	fruit	uninfected	mature	1.17536
SRR7403500	fruit	infected with penicillium expansum	mature	0.918691
SRR7403501	fruit	infected with penicillium expansum	mature	1.85907
SRR7403508	fruit	infected with penicillium expansum	mature	1.34019
SRR7403502	fruit	infected with penicillium expansum	mature	1.58878
SRR7403503	fruit	infected with penicillium expansum	mature	0.848693
SRR7403505	fruit	infected with penicillium expansum	mature	0.832225
SRR1613973	Central seeds	no	20DAPF	6.23236
SRR1613974	Central seeds	no	20DAPF	6.66717
SRR1613975	Central seeds	no	20DAPF	6.33135
SRR1613976	Lateral seeds	no	20DAPF	5.77406
SRR1613977	Lateral seeds	no	20DAPF	5.6822
SRR1613978	Lateral seeds	no	20DAPF	6.36917
SRR3744786	stem	no	mature	0.643979
SRR3744787	stem	no	mature	0.345145
SRR3744772	stem	no	mature	0.635518
SRX765691	seedling shoot apex	no	4-6 week old seedling	2.26299
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.19922
SRR1089478	leaf	Virus-free	plantlets	0.782726
SRR1089477	leaf	ASGV-infected	plantlets	1.47451
SRR767660	leaf	uninfected	fully developed	1.70112
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.62197
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.91714
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	1.19983
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	1.01223
SRR6308182	young leaf	no	immature leaves	1.90634
SRR3744769	leaf	no	mature	0.411183
SRR3744770	leaf	no	mature	0.404282
SRR3744771	leaf	no	mature	0.369827
SRR5405145	leaf	no	mature	0.79666
SRR6320561	leaf	no	mature	0.732163