Gene detail

Detail information of MD03G1170100 Annotation

Gene ID	Annotation
MD03G1170100	titan9

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0143	cyclin-dependent protein serine/threonine kinase regulator activity protein kinase binding regulation of cyclin-dependent protein serine/threonine kinase activity stomatal lineage progression histone kinase activity (H3-S10 specific) exonuclease 1 [EC:3.1.-.-] BR-signaling kinase [EC:2.7.11.1]

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD03G1170100	mRNA	Chr03	23072230	23075570	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT3G20070.2	1	TTN9\|TITAN9
Arabidopsis thaliana	AT3G20070.1	1	TTN9\|TITAN9
Prunus persica	Prupe.4G257000.3.p	1	titan9
Prunus persica	Prupe.4G257000.4.p	1	titan9
Prunus persica	Prupe.4G257000.1.p	1	titan9
Prunus persica	Prupe.4G257000.5.p	0.695	titan9
Pyrus communis	PCP008662.1	1	-
Pyrus x bretschneideri	Pbr027639.1	1	-
Rosa multiflora	Rmu_sc0004550.1_g000018.1	1	-
Rubus occidentalis	Ro03_G25167	1	-
Fragaria vesca	mrna14824.1	1	titan9
Vitis vinifera	GSVIVT01031554001	1	titan9
Solanum lycopersicum	Solyc02g086250.2.1	1	titan9
Populus trichocarpa	Potri.009G049500.1	1	titan9
Nicotiana benthamiana	Niben101Scf02381g08020.1	1	"titan9, putative [Medicago truncatula]"
Oryza sativa	LOC_Os01g04600.2	1	expressed protein
Oryza sativa	LOC_Os06g13640.2	1	expressed protein
Zea mays	GRMZM2G007258_P01	1	-
Zea mays	GRMZM2G019810_P01	0.626	-

Gene Ontology

GO term	Description	Category
GO:0046983	protein dimerization activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.72597
SRR5252888	dormant buds	no	dormant buds(0 month)	0.250156
SRR5252889	dormant buds	no	dormant buds(0 month)	1.83535
SRR5252886	dormant buds	no	dormant buds(1 months)	1.48294
SRR5252887	dormant buds	no	dormant buds(1 months)	0.562884
SRR5252884	dormant buds	no	dormant buds(2 months)	0.898926
SRR5252882	dormant buds	no	dormant buds(3 months)	0.36063
SRR5252883	dormant buds	no	dormant buds(3 months)	0.785935
SRR5252880	dormant buds	no	dormant buds(4 months)	1.79956
SRR5252881	dormant buds	no	dormant buds(4 months)	2.39692
SRR5252878	bud break	no	bud break	6.45268
SRR5252879	bud break	no	bud break	6.7578
SRR3744766	flower	no	mature	1.52828
SRR3744767	flower	no	mature	1.54219
SRR3744768	flower	no	mature	1.79809
SRR6308190	stigmas	no	open flowers	0.849897
SRR6308181	styles	no	open flowers	1.82398
SRR6308188	filaments	no	open flowers	0.732799
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	7.91358
SRR6308192	pollen	no	open flowers	58.1244
SRR6308191	petals	no	open flowers	0.624895
SRR6308194	sepals	no	open flowers	0.908633
SRR6308193	receptacles	no	open flowers	1.8113
SRR6308189	ovaries	no	open flowers	2.84386
SRR3384922	fruit	no	1 week after full bloom	2.44802
SRR3384921	fruit	no	2 week after full bloom	5.39103
SRR3384920	fruit	no	3 week after full bloom	3.78142
SRR3384919	fruit	no	4 week after full bloom	1.70957
SRR3384923	fruit	no	5 week after full bloom	1.41373
SRR3384918	fruit	no	6 week after full bloom	1.73115
SRR3384917	fruit	no	8 week after full bloom	1.59049
SRR3384916	fruit	no	10 week after full bloom	0.664127
SRR3384915	fruit	no	12 week after full bloom	1.7462
SRR3384914	fruit	no	14 week after full bloom	0.846781
SRR3384913	fruit	no	16 week after full bloom	0.29921
SRR3384912	fruit	no	18 week after full bloom	0.748781
SRR3384911	fruit	no	19 week after full bloom	0.179542
SRR3384910	fruit	no	20 week after full bloom	0.140577
SRR768128	whole fruit	no	25 days post anthesis	9.42435
SRR768129	whole fruit	no	35 days post anthesis	3.11593
SRR768130	whole fruit	no	60 days post anthesis	0.746307
SRR768131	whole fruit	no	87 days post anthesis	0.421314
SRR7343308	immature fruit flesh	no	immature	1.49763
SRR7343309	immature fruit flesh	no	immature	0.498518
SRR6320494	ripe fruit flesh	no	mature	0.474488
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.0467824
SRR7403506	fruit	uninfected	mature	0.296513
SRR7403507	fruit	uninfected	mature	0.0586764
SRR7403500	fruit	infected with penicillium expansum	mature	0.725468
SRR7403501	fruit	infected with penicillium expansum	mature	0.717719
SRR7403508	fruit	infected with penicillium expansum	mature	1.55219
SRR7403502	fruit	infected with penicillium expansum	mature	0.800048
SRR7403503	fruit	infected with penicillium expansum	mature	1.22869
SRR7403505	fruit	infected with penicillium expansum	mature	1.30525
SRR1613973	Central seeds	no	20DAPF	0.927968
SRR1613974	Central seeds	no	20DAPF	1.5163
SRR1613975	Central seeds	no	20DAPF	1.427
SRR1613976	Lateral seeds	no	20DAPF	1.25495
SRR1613977	Lateral seeds	no	20DAPF	1.47048
SRR1613978	Lateral seeds	no	20DAPF	1.48622
SRR3744786	stem	no	mature	0.825619
SRR3744787	stem	no	mature	0.817396
SRR3744772	stem	no	mature	0.543486
SRX765691	seedling shoot apex	no	4-6 week old seedling	6.31302
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	7.72178
SRR1089478	leaf	Virus-free	plantlets	2.58456
SRR1089477	leaf	ASGV-infected	plantlets	2.13011
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0.511715
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.353317
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.69895
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.492979
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.208823
SRR6308182	young leaf	no	immature leaves	10.4417
SRR3744769	leaf	no	mature	0.922086
SRR3744770	leaf	no	mature	1.35686
SRR3744771	leaf	no	mature	0.878551
SRR5405145	leaf	no	mature	0.576708
SRR6320561	leaf	no	mature	0.63268