Gene detail

Detail information of MD03G1194300 Annotation

Gene ID	Annotation
MD03G1194300	ethylene response factor 7

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD03G1194300	mRNA	Chr03	26651109	26651798	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Transcription Factors Family	ERF

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT3G20310.1	1	ATERF7;ATERF-7;ERF7\|ethylene response factor 7
Arabidopsis thaliana	AT1G50640.1	1	ATERF3;ERF3\|ethylene responsive element binding factor 3
Prunus persica	Prupe.4G222300.1.p	1	ethylene response factor 7
Pyrus communis	PCP026395.1	1	-
Pyrus x bretschneideri	Pbr039770.1	1	-
Rosa multiflora	Rmu_sc0002715.1_g000012.1	1	-
Rubus occidentalis	Ro03_G18867	1	-
Fragaria vesca	mrna03450.1	1	ethylene response factor 7
Vitis vinifera	GSVIVT01037712001	1	ethylene responsive element binding factor 3
Populus trichocarpa	Potri.001G356100.1	1	ethylene responsive element binding factor 3
Nicotiana benthamiana	Niben101Scf07310g01001.1	1	Ethylene-responsive transcription factor 3

Gene Ontology

GO term	Description	Category
GO:0003700	transcription factor activity, sequence-specific DNA binding	molecular_function
GO:0003677	DNA binding	molecular_function

KEGG

KO	Description	Enzyme
K09286	EREBP-like factor	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00847.16	AP2	30	79	1.90E-12

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	53.8698
SRR5252888	dormant buds	no	dormant buds(0 month)	3.72168
SRR5252889	dormant buds	no	dormant buds(0 month)	5.02993
SRR5252886	dormant buds	no	dormant buds(1 months)	4.72766
SRR5252887	dormant buds	no	dormant buds(1 months)	9.63043
SRR5252884	dormant buds	no	dormant buds(2 months)	2.3404
SRR5252882	dormant buds	no	dormant buds(3 months)	3.01796
SRR5252883	dormant buds	no	dormant buds(3 months)	8.76953
SRR5252880	dormant buds	no	dormant buds(4 months)	1.6733
SRR5252881	dormant buds	no	dormant buds(4 months)	3.90032
SRR5252878	bud break	no	bud break	4.99997
SRR5252879	bud break	no	bud break	3.32666
SRR3744766	flower	no	mature	54.4445
SRR3744767	flower	no	mature	56.0336
SRR3744768	flower	no	mature	59.8909
SRR6308190	stigmas	no	open flowers	18.7768
SRR6308181	styles	no	open flowers	23.7538
SRR6308188	filaments	no	open flowers	14.6799
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	38.5216
SRR6308192	pollen	no	open flowers	139.523
SRR6308191	petals	no	open flowers	9.06074
SRR6308194	sepals	no	open flowers	5.49203
SRR6308193	receptacles	no	open flowers	4.37762
SRR6308189	ovaries	no	open flowers	14.1988
SRR3384922	fruit	no	1 week after full bloom	74.9024
SRR3384921	fruit	no	2 week after full bloom	62.5501
SRR3384920	fruit	no	3 week after full bloom	62.1107
SRR3384919	fruit	no	4 week after full bloom	55.7219
SRR3384923	fruit	no	5 week after full bloom	48.2574
SRR3384918	fruit	no	6 week after full bloom	67.7726
SRR3384917	fruit	no	8 week after full bloom	61.286
SRR3384916	fruit	no	10 week after full bloom	39.3959
SRR3384915	fruit	no	12 week after full bloom	36.868
SRR3384914	fruit	no	14 week after full bloom	25.0455
SRR3384913	fruit	no	16 week after full bloom	33.7666
SRR3384912	fruit	no	18 week after full bloom	30.9917
SRR3384911	fruit	no	19 week after full bloom	31.0606
SRR3384910	fruit	no	20 week after full bloom	31.2494
SRR768128	whole fruit	no	25 days post anthesis	11.4306
SRR768129	whole fruit	no	35 days post anthesis	15.4334
SRR768130	whole fruit	no	60 days post anthesis	38.9858
SRR768131	whole fruit	no	87 days post anthesis	9.34883
SRR7343308	immature fruit flesh	no	immature	43.7478
SRR7343309	immature fruit flesh	no	immature	62.3833
SRR6320494	ripe fruit flesh	no	mature	42.7228
SRR5405143	ripe fruit peel	no	mature	26.8137
SRR6320572	ripe fruit peel	no	mature	88.6197
SRR7403504	fruit	uninfected	mature	32.9279
SRR7403506	fruit	uninfected	mature	32.9528
SRR7403507	fruit	uninfected	mature	37.6043
SRR7403500	fruit	infected with penicillium expansum	mature	57.781
SRR7403501	fruit	infected with penicillium expansum	mature	53.1756
SRR7403508	fruit	infected with penicillium expansum	mature	56.7821
SRR7403502	fruit	infected with penicillium expansum	mature	44.2713
SRR7403503	fruit	infected with penicillium expansum	mature	55.0336
SRR7403505	fruit	infected with penicillium expansum	mature	48.7247
SRR1613973	Central seeds	no	20DAPF	18.7978
SRR1613974	Central seeds	no	20DAPF	17.8963
SRR1613975	Central seeds	no	20DAPF	24.1678
SRR1613976	Lateral seeds	no	20DAPF	14.342
SRR1613977	Lateral seeds	no	20DAPF	19.9284
SRR1613978	Lateral seeds	no	20DAPF	16.3411
SRR3744786	stem	no	mature	76.5308
SRR3744787	stem	no	mature	75.7458
SRR3744772	stem	no	mature	76.5833
SRX765691	seedling shoot apex	no	4-6 week old seedling	12.6362
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	16.9757
SRR1089478	leaf	Virus-free	plantlets	31.8257
SRR1089477	leaf	ASGV-infected	plantlets	24.6869
SRR767660	leaf	uninfected	fully developed	49.6746
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	35.1492
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	61.3941
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	124.538
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	59.5433
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	40.7073
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	37.6574
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	31.1142
SRR6308182	young leaf	no	immature leaves	13.4033
SRR3744769	leaf	no	mature	68.6892
SRR3744770	leaf	no	mature	61.3904
SRR3744771	leaf	no	mature	63.1903
SRR5405145	leaf	no	mature	40.5976
SRR6320561	leaf	no	mature	60.8465