| Gene ID | Annotation |
|---|---|
| MD03G1212400 | galacturonosyltransferase 12 |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0296 | plant-type secondary cell wall biogenesis cellulose synthase (UDP-forming) activity xylan biosynthetic process cellulose synthase A [EC:2.4.1.12] xylem development glucuronoxylan metabolic process glucuronoxylan biosynthetic process cellulose biosynthetic process rhamnogalacturonan I side chain metabolic process positive regulation of abscisic acid biosynthetic process glucuronoxylan glucuronosyltransferase activity hydrogen peroxide biosynthetic process protein desumoylation response to osmotic stress Golgi apparatus plasma membrane vegetative to reproductive phase transition of meristem defense response to fungus defense response to bacterium xylosyltransferase activity galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity galacturonosyltransferase 12/13/14/15 [EC:2.4.1.-] |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD03G1212400 | mRNA | Chr03 | 29168880 | 29174489 | + |
| CDS: |
| MD03G1212400 |
| Protein: |
| MD03G1212400 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT8 |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT5G54690.1 | 1 | GAUT12;IRX8;LGT6|galacturonosyltransferase 12;IRREGULAR XYLEM 8; |
| Pyrus communis | PCP015366.1 | 1 | - |
| Pyrus x bretschneideri | Pbr033653.1 | 1 | - |
| Rosa multiflora | Rmu_sc0022939.1_g000001.1 | 1 | - |
| Rubus occidentalis | Ro03_G16935 | 1 | - |
| Solanum lycopersicum | Solyc07g064050.2.1 | 1 | galacturonosyltransferase 12 |
| Solanum lycopersicum | Solyc02g067060.2.1 | 1 | galacturonosyltransferase 13 |
| Populus trichocarpa | Potri.001G416800.1 | 1 | galacturonosyltransferase 12 |
| Nicotiana benthamiana | Niben101Scf13644g00002.1 | 1 | transferase (transferring glycosyl group) [Oryza sativa Indica Group] |
| Nicotiana benthamiana | Niben101Scf02270g00005.1 | 0.84 | transferase (transferring glycosyl group) [Oryza sativa Indica Group] |
| GO term | Description | Category |
|---|---|---|
| -- | -- | -- |
| KO | Description | Enzyme |
|---|---|---|
| K20867 | galacturonosyltransferase 12/13/14/15 | EC:2.4.1.- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |