| Gene ID | Annotation |
|---|---|
| MD04G1011000 | GTP binding Elongation factor Tu family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0337 | plasmodesma elongation factor 1-alpha translation elongation factor activity translational elongation translation vacuole structural constituent of ribosome cytosolic large ribosomal subunit GTPase activity rRNA (adenine-N6 rRNA modification large subunit ribosomal protein L17e large subunit ribosomal protein L10Ae 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] small subunit ribosomal protein S5e calmodulin binding GTP binding nucleolus RNA binding cell fate specification |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD04G1011000 | mRNA | Chr04 | 1196381 | 1199207 | - |
| CDS: |
| MD04G1011000 |
| Protein: |
| MD04G1011000 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| -- | -- | -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005737 | cytoplasm | cellular component |
| GO:0005525 | GTP binding | molecular_function |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0003746 | translation elongation factor activity | molecular_function |
| GO:0006414 | translational elongation | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| K03231 | elongation factor 1-alpha | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00009.23 | GTP_EFTU | 8 | 173 | 1.30E-38 |
| PF03144.21 | GTP_EFTU_D2 | 200 | 265 | 2.20E-14 |
| PF03143.13 | GTP_EFTU_D3 | 274 | 381 | 8.00E-39 |
 |