Gene detail

Detail information of MD04G1071200 Annotation

Gene ID	Annotation
MD04G1071200	Subtilase family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0088	extracellular region aspartic-type endopeptidase activity regulation of double fertilization forming a zygote and endosperm proteolysis

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD04G1071200	mRNA	Chr04	9677625	9679322	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.5G086100.1.p	1	Subtilase family protein
Pyrus communis	PCP021829.1	1	-
Vitis vinifera	GSVIVT01019919001	1	Subtilase family protein

Gene Ontology

GO term	Description	Category
GO:0004252	serine-type endopeptidase activity	molecular_function
GO:0006508	proteolysis	biological_process

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00082.18	Peptidase_S8	4	305	6.60E-24

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	2.37064
SRR5252888	dormant buds	no	dormant buds(0 month)	4.02777
SRR5252889	dormant buds	no	dormant buds(0 month)	4.97702
SRR5252886	dormant buds	no	dormant buds(1 months)	3.41099
SRR5252887	dormant buds	no	dormant buds(1 months)	3.4802
SRR5252884	dormant buds	no	dormant buds(2 months)	3.93683
SRR5252882	dormant buds	no	dormant buds(3 months)	1.27743
SRR5252883	dormant buds	no	dormant buds(3 months)	2.78396
SRR5252880	dormant buds	no	dormant buds(4 months)	3.24517
SRR5252881	dormant buds	no	dormant buds(4 months)	3.34472
SRR5252878	bud break	no	bud break	6.58001
SRR5252879	bud break	no	bud break	2.56018
SRR3744766	flower	no	mature	0.996893
SRR3744767	flower	no	mature	1.87272
SRR3744768	flower	no	mature	1.49795
SRR6308190	stigmas	no	open flowers	2.58017
SRR6308181	styles	no	open flowers	3.16952
SRR6308188	filaments	no	open flowers	8.09412
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.982127
SRR6308192	pollen	no	open flowers	3.4931
SRR6308191	petals	no	open flowers	2.64452
SRR6308194	sepals	no	open flowers	0.39431
SRR6308193	receptacles	no	open flowers	1.5723
SRR6308189	ovaries	no	open flowers	1.66102
SRR3384922	fruit	no	1 week after full bloom	1.84824
SRR3384921	fruit	no	2 week after full bloom	1.64756
SRR3384920	fruit	no	3 week after full bloom	0.0518109
SRR3384919	fruit	no	4 week after full bloom	0.43079
SRR3384923	fruit	no	5 week after full bloom	0.364158
SRR3384918	fruit	no	6 week after full bloom	0.608075
SRR3384917	fruit	no	8 week after full bloom	0.146317
SRR3384916	fruit	no	10 week after full bloom	0.285117
SRR3384915	fruit	no	12 week after full bloom	0.281123
SRR3384914	fruit	no	14 week after full bloom	0.10906
SRR3384913	fruit	no	16 week after full bloom	0.128454
SRR3384912	fruit	no	18 week after full bloom	0.180821
SRR3384911	fruit	no	19 week after full bloom	0.231239
SRR3384910	fruit	no	20 week after full bloom	0.226317
SRR768128	whole fruit	no	25 days post anthesis	4.44854
SRR768129	whole fruit	no	35 days post anthesis	3.87939
SRR768130	whole fruit	no	60 days post anthesis	0.48179
SRR768131	whole fruit	no	87 days post anthesis	1.81324
SRR7343308	immature fruit flesh	no	immature	2.56931
SRR7343309	immature fruit flesh	no	immature	1.60247
SRR6320494	ripe fruit flesh	no	mature	1.53561
SRR5405143	ripe fruit peel	no	mature	1.4345
SRR6320572	ripe fruit peel	no	mature	2.12978
SRR7403504	fruit	uninfected	mature	1.02612
SRR7403506	fruit	uninfected	mature	1.30711
SRR7403507	fruit	uninfected	mature	1.02203
SRR7403500	fruit	infected with penicillium expansum	mature	0.0780017
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0.417226
SRR7403502	fruit	infected with penicillium expansum	mature	0.258061
SRR7403503	fruit	infected with penicillium expansum	mature	0.216175
SRR7403505	fruit	infected with penicillium expansum	mature	0.194316
SRR1613973	Central seeds	no	20DAPF	89.4309
SRR1613974	Central seeds	no	20DAPF	81.9103
SRR1613975	Central seeds	no	20DAPF	72.0548
SRR1613976	Lateral seeds	no	20DAPF	67.6449
SRR1613977	Lateral seeds	no	20DAPF	73.6464
SRR1613978	Lateral seeds	no	20DAPF	72.2527
SRR3744786	stem	no	mature	1.42593
SRR3744787	stem	no	mature	1.85629
SRR3744772	stem	no	mature	1.06148
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.46102
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.60105
SRR1089478	leaf	Virus-free	plantlets	0.208933
SRR1089477	leaf	ASGV-infected	plantlets	0.405168
SRR767660	leaf	uninfected	fully developed	2.22518
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.14499
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	5.47533
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.51626
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	2.08316
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	3.10742
SRR6308182	young leaf	no	immature leaves	1.32046
SRR3744769	leaf	no	mature	1.91728
SRR3744770	leaf	no	mature	1.69561
SRR3744771	leaf	no	mature	2.01466
SRR5405145	leaf	no	mature	3.72021
SRR6320561	leaf	no	mature	1.77928