Gene detail

Detail information of MD04G1087700 Annotation

Gene ID	Annotation
MD04G1087700	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0088	extracellular region aspartic-type endopeptidase activity regulation of double fertilization forming a zygote and endosperm proteolysis

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD04G1087700	mRNA	Chr04	13014260	13015039	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G62500.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Prunus persica	Prupe.5G073000.1.p	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Pyrus communis	PCP020308.1	1	-
Pyrus x bretschneideri	Pbr023675.1	1	-
Rosa multiflora	Rmu_sc0003429.1_g000016.1	1	-
Rosa multiflora	Rmu_sc0002590.1_g000023.1	1	-
Rubus occidentalis	Ro05_G08633	1	-
Fragaria vesca	mrna31761.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Vitis vinifera	GSVIVT01001298001	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Populus trichocarpa	Potri.003G111300.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Nicotiana benthamiana	Niben101Scf13429g02005.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein LENGTH=297

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14547.2	Hydrophob_seed	174	257	2.60E-25

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.17745
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	0
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0.563969
SRR5252883	dormant buds	no	dormant buds(3 months)	0.153635
SRR5252880	dormant buds	no	dormant buds(4 months)	0.844268
SRR5252881	dormant buds	no	dormant buds(4 months)	1.87421
SRR5252878	bud break	no	bud break	1.40153
SRR5252879	bud break	no	bud break	9.48026
SRR3744766	flower	no	mature	3.59372
SRR3744767	flower	no	mature	3.48873
SRR3744768	flower	no	mature	2.85408
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0.186714
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.240205
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	0
SRR3384922	fruit	no	1 week after full bloom	4.48921
SRR3384921	fruit	no	2 week after full bloom	10.8619
SRR3384920	fruit	no	3 week after full bloom	0.377531
SRR3384919	fruit	no	4 week after full bloom	1.04635
SRR3384923	fruit	no	5 week after full bloom	0
SRR3384918	fruit	no	6 week after full bloom	0
SRR3384917	fruit	no	8 week after full bloom	0
SRR3384916	fruit	no	10 week after full bloom	0.230841
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	4.26291
SRR768129	whole fruit	no	35 days post anthesis	26.1806
SRR768130	whole fruit	no	60 days post anthesis	23.8366
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0.440467
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	90.5269
SRR1613974	Central seeds	no	20DAPF	67.8165
SRR1613975	Central seeds	no	20DAPF	78.2589
SRR1613976	Lateral seeds	no	20DAPF	110.688
SRR1613977	Lateral seeds	no	20DAPF	88.6431
SRR1613978	Lateral seeds	no	20DAPF	94.3077
SRR3744786	stem	no	mature	3.07185
SRR3744787	stem	no	mature	2.92032
SRR3744772	stem	no	mature	2.10687
SRX765691	seedling shoot apex	no	4-6 week old seedling	5.97155
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	3.19314
SRR1089478	leaf	Virus-free	plantlets	21.5837
SRR1089477	leaf	ASGV-infected	plantlets	14.9902
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	12.5664
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.26939
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.328088
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	2.91808
SRR6308182	young leaf	no	immature leaves	5.14134
SRR3744769	leaf	no	mature	15.2898
SRR3744770	leaf	no	mature	13.7128
SRR3744771	leaf	no	mature	14.7107
SRR5405145	leaf	no	mature	0.899599
SRR6320561	leaf	no	mature	0.32587