| Gene ID | Annotation |
|---|---|
| MD04G1204800 | peptidoglycan-binding LysM domain-containing protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| -- | -- | -- |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD04G1204800 | mRNA | Chr04 | 29104941 | 29106157 | - |
| CDS: |
| MD04G1204800 |
| Protein: |
| MD04G1204800 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | F-box |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G55000.2 | 1 | peptidoglycan-binding LysM domain-containing protein |
| Arabidopsis thaliana | AT1G55000.3 | 1 | peptidoglycan-binding LysM domain-containing protein |
| Arabidopsis thaliana | AT1G55000.1 | 1 | peptidoglycan-binding LysM domain-containing protein |
| Prunus persica | Prupe.6G324800.1.p | 1 | peptidoglycan-binding LysM domain-containing protein |
| Pyrus communis | PCP003544.1 | 1 | - |
| Pyrus x bretschneideri | Pbr020430.1 | 1 | - |
| Pyrus x bretschneideri | Pbr020417.1 | 1 | - |
| Rosa multiflora | Rmu_sc0001861.1_g000058.1 | 1 | - |
| Rubus occidentalis | Ro06_G15290 | 1 | - |
| Vitis vinifera | GSVIVT01000081001 | 1 | peptidoglycan-binding LysM domain-containing protein |
| Solanum lycopersicum | Solyc01g099130.2.1 | 1 | peptidoglycan-binding LysM domain-containing protein |
| Populus trichocarpa | Potri.013G021600.1 | 1 | peptidoglycan-binding LysM domain-containing protein |
| Nicotiana benthamiana | Niben101Scf01434g02006.1 | 1 | peptidoglycan-binding LysM domain-containing protein LENGTH=221 |
| Oryza sativa | LOC_Os03g49250.1 | 1 | "OsFBO16 - F-box and other domain containing protein, expressed" |
| Zea mays | GRMZM2G123128_P01 | 1 | LysM domain containing protein |
| GO term | Description | Category |
|---|---|---|
| GO:0005515 | protein binding | molecular_function |
| GO:0016998 | cell wall macromolecule catabolic process | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12937.3 | F-box-like | 55 | 84 | 1.10E-05 |
| PF01476.16 | LysM | 122 | 165 | 1.50E-05 |
 |