Detail information of MD05G1010400 Annotation
Gene IDAnnotation
MD05G1010400F-box/RNI-like superfamily protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD05G1010400mRNAChr0521283652132253+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Ubiquitin FamilyF-box

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G21410.11SKP2A|F-box/RNI-like superfamily protein
Prunus persicaPrupe.8G012800.1.p1F-box/RNI-like superfamily protein
Prunus persicaPrupe.8G012800.3.p1F-box/RNI-like superfamily protein
Pyrus communisPCP018427.11-
Pyrus x bretschneideriPbr010049.31-
Rosa multifloraRmu_sc0001874.1_g000005.11-
Rubus occidentalisRo02_G274461-
Fragaria vescamrna00996.11F-box/RNI-like superfamily protein
Vitis viniferaGSVIVT010099810011RNI-like superfamily protein
Solanum lycopersicumSolyc04g063380.2.11F-box/RNI-like superfamily protein
Solanum lycopersicumSolyc06g005380.2.11RNI-like superfamily protein
Populus trichocarpaPotri.005G185700.11RNI-like superfamily protein
Nicotiana benthamianaNiben101Scf07475g00009.11F-box/LRR-repeat protein 2
Oryza sativaLOC_Os01g65920.11"F-box/LRR-repeat protein 2, putative, expressed"
Oryza sativaLOC_Os05g35110.11"OsFBL22 - F-box domain and LRR containing protein, expressed"
Zea maysGRMZM2G138176_P011F-box/LRR-repeat protein 2;

Gene Ontology
GO termDescriptionCategory
GO:0005515protein bindingmolecular_function

KEGG
KODescriptionEnzyme
K03875F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.3F-box-like61951.20E-05


Expression pattern
TOP