Detail information of MD05G1045200 Annotation
Gene IDAnnotation
MD05G1045200CLP protease proteolytic subunit 6

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
------

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD05G1045200mRNAChr0577485267753850+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
----

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G11750.11CLPP6;NCLPP1;NCLPP6|CLP protease proteolytic subunit 6;NUCLEAR-ENCODED CLPP 1;
Arabidopsis thalianaAT1G11750.20.904CLPP6;NCLPP1;NCLPP6|CLP protease proteolytic subunit 6;NUCLEAR-ENCODED CLPP 1;
Prunus persicaPrupe.8G061700.1.p1CLP protease proteolytic subunit 6
Rosa multifloraRmu_sc0018708.1_g000009.11-
Rosa multifloraRmu_sc0016068.1_g000003.10.976-
Rubus occidentalisRo02_G217621-
Vitis viniferaGSVIVT010319360011CLP protease proteolytic subunit 6
Solanum lycopersicumSolyc10g051310.1.11CLP protease proteolytic subunit 6
Populus trichocarpaPotri.004G152900.11CLP protease proteolytic subunit 6
Nicotiana benthamianaNiben101Scf00321g05030.11ATP-dependent Clp protease proteolytic subunit
Nicotiana benthamianaNiben101Scf06203g02016.10.8ATP-dependent Clp protease proteolytic subunit
Oryza sativaLOC_Os03g29810.11"OsClp6 - Putative Clp protease homologue, expressed"
Zea maysGRMZM2G092632_P011ATP-dependent Clp protease proteolytic subunit

Gene Ontology
GO termDescriptionCategory
GO:0004252serine-type endopeptidase activitymolecular_function
GO:0006508proteolysisbiological_process

KEGG
KODescriptionEnzyme
K01358"ATP-dependent Clp protease, protease subunit"EC:3.4.21.92

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00574.19CLP_protease1042772.60E-66


Expression pattern
TOP