| Gene ID | Annotation |
|---|---|
| MD05G1083400 | RING/U-box superfamily protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0062 | metallocarboxypeptidase activity |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD05G1083400 | mRNA | Chr05 | 17433439 | 17435837 | - |
| CDS: |
| MD05G1083400 |
| Protein: |
| MD05G1083400 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT4G00070.1 | 1 | RING/U-box superfamily protein |
| Rosa multiflora | Rmu_co8438249.1_g000001.1 | 1 | - |
| Vitis vinifera | GSVIVT01031717001 | 1 | RING/U-box superfamily protein |
| Populus trichocarpa | Potri.015G138700.1 | 1 | RING/U-box superfamily protein |
| Nicotiana benthamiana | Niben101Scf04995g00012.1 | 1 | RING finger protein 44 |
| Oryza sativa | LOC_Os01g49770.1 | 1 | "zinc finger, C3HC4 type domain containing protein, expressed" |
| Zea mays | GRMZM2G122223_P01 | 1 | - |
| Zea mays | GRMZM5G843389_P01 | 1 | Protein binding protein; Putative RING zinc finger domain superfamily protein |
| GO term | Description | Category |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13639.2 | zf-RING_2 | 98 | 140 | 3.30E-11 |
 |