Detail information of MD05G1092200 Annotation
Gene IDAnnotation
MD05G1092200Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0917nuclear cohesin complex
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
post-translational protein modification
embryo sac egg cell differentiation

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD05G1092200mRNAChr051953840019546536-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Transcription Factors FamilyHB

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT3G19510.11HAT3.1|Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.7.p1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.8.p1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.2.p1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.9.p1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.1.p1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.3.p0.989Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.4.p0.989Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.5.p0.989Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Prunus persicaPrupe.8G137800.6.p0.989Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Pyrus communisPCP042615.11-
Pyrus x bretschneideriPbr009810.11-
Rubus occidentalisRo02_G055051-
Fragaria vescamrna22839.11Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Vitis viniferaGSVIVT010378940011Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Solanum lycopersicumSolyc01g107410.2.11Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Populus trichocarpaPotri.001G298400.11Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Populus trichocarpaPotri.009G093000.20.64Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Nicotiana benthamianaNiben101Scf01341g03011.11Chromodomain-helicase-DNA-binding protein Mi-2 homolog
Nicotiana benthamianaNiben101Scf03385g06008.10.901Chromodomain-helicase-DNA-binding protein Mi-2 homolog
Oryza sativaLOC_Os06g12400.11"Homeobox domain containing protein, expressed"
Zea maysGRMZM2G474656_P011Putative homeodomain-like transcription factor superfamily protein
Zea maysGRMZM2G094935_P011Putative homeodomain-like transcription factor superfamily protein

Gene Ontology
GO termDescriptionCategory
GO:0043565sequence-specific DNA bindingmolecular_function
GO:0005515protein bindingmolecular_function
GO:0003700transcription factor activity, sequence-specific DNA bindingmolecular_function
GO:0008270zinc ion bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00628.25PHD5325872.40E-10
PF00046.25Homeobox9199693.30E-11


Expression pattern
TOP