Gene detail

Detail information of MD05G1164800 Annotation

Gene ID	Annotation
MD05G1164800	Ribosomal protein L32e

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD05G1164800	mRNA	Chr05	29341039	29342943	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
--	--	--	--

Gene Ontology

GO term	Description	Category
GO:0003735	structural constituent of ribosome	molecular_function
GO:0005840	ribosome	cellular component
GO:0006412	translation	biological_process

KEGG

KO	Description	Enzyme
K02912	large subunit ribosomal protein L32e	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	173.929
SRR5252888	dormant buds	no	dormant buds(0 month)	142.473
SRR5252889	dormant buds	no	dormant buds(0 month)	133.809
SRR5252886	dormant buds	no	dormant buds(1 months)	109.006
SRR5252887	dormant buds	no	dormant buds(1 months)	108.04
SRR5252884	dormant buds	no	dormant buds(2 months)	130.641
SRR5252882	dormant buds	no	dormant buds(3 months)	160.773
SRR5252883	dormant buds	no	dormant buds(3 months)	174.675
SRR5252880	dormant buds	no	dormant buds(4 months)	199.564
SRR5252881	dormant buds	no	dormant buds(4 months)	148.936
SRR5252878	bud break	no	bud break	156.764
SRR5252879	bud break	no	bud break	239.413
SRR3744766	flower	no	mature	39.734
SRR3744767	flower	no	mature	43.8374
SRR3744768	flower	no	mature	37.1024
SRR6308190	stigmas	no	open flowers	29.7858
SRR6308181	styles	no	open flowers	45.3918
SRR6308188	filaments	no	open flowers	74.271
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	14.1662
SRR6308192	pollen	no	open flowers	5.59961
SRR6308191	petals	no	open flowers	66.8717
SRR6308194	sepals	no	open flowers	43.0264
SRR6308193	receptacles	no	open flowers	76.7523
SRR6308189	ovaries	no	open flowers	62.1692
SRR3384922	fruit	no	1 week after full bloom	181.938
SRR3384921	fruit	no	2 week after full bloom	172.17
SRR3384920	fruit	no	3 week after full bloom	143.803
SRR3384919	fruit	no	4 week after full bloom	149.982
SRR3384923	fruit	no	5 week after full bloom	111.625
SRR3384918	fruit	no	6 week after full bloom	130.032
SRR3384917	fruit	no	8 week after full bloom	136.262
SRR3384916	fruit	no	10 week after full bloom	116.336
SRR3384915	fruit	no	12 week after full bloom	139.934
SRR3384914	fruit	no	14 week after full bloom	117.31
SRR3384913	fruit	no	16 week after full bloom	112.966
SRR3384912	fruit	no	18 week after full bloom	82.7268
SRR3384911	fruit	no	19 week after full bloom	78.8745
SRR3384910	fruit	no	20 week after full bloom	53.3812
SRR768128	whole fruit	no	25 days post anthesis	134.129
SRR768129	whole fruit	no	35 days post anthesis	135.225
SRR768130	whole fruit	no	60 days post anthesis	107.995
SRR768131	whole fruit	no	87 days post anthesis	61.4714
SRR7343308	immature fruit flesh	no	immature	62.1511
SRR7343309	immature fruit flesh	no	immature	81.7144
SRR6320494	ripe fruit flesh	no	mature	39.5877
SRR5405143	ripe fruit peel	no	mature	39.3316
SRR6320572	ripe fruit peel	no	mature	58.2288
SRR7403504	fruit	uninfected	mature	55.7806
SRR7403506	fruit	uninfected	mature	53.8845
SRR7403507	fruit	uninfected	mature	53.6992
SRR7403500	fruit	infected with penicillium expansum	mature	54.221
SRR7403501	fruit	infected with penicillium expansum	mature	59.8193
SRR7403508	fruit	infected with penicillium expansum	mature	61.2181
SRR7403502	fruit	infected with penicillium expansum	mature	50.4684
SRR7403503	fruit	infected with penicillium expansum	mature	39.4292
SRR7403505	fruit	infected with penicillium expansum	mature	42.3993
SRR1613973	Central seeds	no	20DAPF	232.909
SRR1613974	Central seeds	no	20DAPF	224.712
SRR1613975	Central seeds	no	20DAPF	240.287
SRR1613976	Lateral seeds	no	20DAPF	198.929
SRR1613977	Lateral seeds	no	20DAPF	240.052
SRR1613978	Lateral seeds	no	20DAPF	225.381
SRR3744786	stem	no	mature	63.4179
SRR3744787	stem	no	mature	67.8228
SRR3744772	stem	no	mature	62.0901
SRX765691	seedling shoot apex	no	4-6 week old seedling	101.233
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	88.1135
SRR1089478	leaf	Virus-free	plantlets	61.5356
SRR1089477	leaf	ASGV-infected	plantlets	59.3387
SRR767660	leaf	uninfected	fully developed	69.1758
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	40.4495
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	78.8888
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	193.141
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	55.7393
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	79.2673
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	60.1848
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	72.9851
SRR6308182	young leaf	no	immature leaves	138.561
SRR3744769	leaf	no	mature	46.7032
SRR3744770	leaf	no	mature	40.9367
SRR3744771	leaf	no	mature	44.5097
SRR5405145	leaf	no	mature	18.0966
SRR6320561	leaf	no	mature	38.6766