Detail information of MD05G1302400 Annotation
Gene IDAnnotation
MD05G1302400basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0107polygalacturonase [EC:3.2.1.15]
1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14]

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD05G1302400mRNAChr054348396143487790-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Pyrus x bretschneideriPbr000478.11-
Rubus occidentalisRo03_G052331-
Vitis viniferaGSVIVT010206880011basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Solanum lycopersicumSolyc07g053290.2.11basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Solanum lycopersicumSolyc05g009880.2.11basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Solanum lycopersicumSolyc03g095980.2.11basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Populus trichocarpaPotri.004G055700.11basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Nicotiana benthamianaNiben101Scf01710g04007.11Transcription factor bHLH51
Nicotiana benthamianaNiben101Scf03309g07006.11Transcription factor bHLH30
Nicotiana benthamianaNiben101Scf03596g00009.10.779Transcription factor bHLH30
Oryza sativaLOC_Os01g11910.11"basic helix-loop-helix, putative, expressed"
Zea maysGRMZM2G166642_P011Putative HLH DNA-binding domain superfamily protein
Zea maysGRMZM2G016039_P011Putative HLH DNA-binding domain superfamily protein

Gene Ontology
GO termDescriptionCategory
GO:0046983protein dimerization activitymolecular_function

KEGG
KODescriptionEnzyme
------

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.22HLH741209.30E-09


Expression pattern
TOP