Detail information of MD06G1002800 Annotation
Gene IDAnnotation
MD06G1002800P-loop containing nucleoside triphosphate hydrolases superfamily protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0185

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD06G1002800mRNAChr06285654292137-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G20920.11RCF1|regulator of CBF gene expression 1
Prunus persicaPrupe.5G003900.8.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persicaPrupe.5G003900.2.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persicaPrupe.5G003900.3.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persicaPrupe.5G003900.4.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persicaPrupe.5G003900.7.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persicaPrupe.5G003900.5.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persicaPrupe.5G003900.6.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persicaPrupe.5G003900.1.p1P-loop containing nucleoside triphosphate hydrolases superfamily protein
Pyrus communisPCP018462.11-
Pyrus x bretschneideriPbr015113.11-
Rosa multifloraRmu_sc0002114.1_g000002.11-
Rosa multifloraRmu_sc0013777.1_g000004.10.993-
Rubus occidentalisRo05_G138821-
Fragaria vescamrna29180.11P-loop containing nucleoside triphosphate hydrolases superfamily protein
Populus trichocarpaPotri.002G003600.11P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nicotiana benthamianaNiben101Scf05548g02005.11ATP-dependent RNA helicase DED1
Oryza sativaLOC_Os08g06344.11"transposon protein, putative, CACTA, En/Spm sub-class, expressed"
Zea maysGRMZM2G030659_P011Putative DEAD-box ATP-dependent RNA helicase family protein

Gene Ontology
GO termDescriptionCategory
GO:0008026ATP-dependent helicase activitymolecular_function
GO:0003676nucleic acid bindingmolecular_function
GO:0005524ATP bindingmolecular_function

KEGG
KODescriptionEnzyme
K12811ATP-dependent RNA helicase DDX46/PRP5EC:3.6.4.13

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00270.25DEAD5517223.90E-48


Expression pattern
TOP