Gene detail

Detail information of MD06G1012900 Annotation

Gene ID	Annotation
MD06G1012900	Pectinacetylesterase family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0149	coniferyl-alcohol glucosyltransferase [EC:2.4.1.111] O-palmitoleoyl-L-serine hydrolase [EC:3.1.1.98] CYP81B26

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD06G1012900	mRNA	Chr06	1634018	1639343	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CE13

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G19420.1	1	Pectinacetylesterase family protein
Arabidopsis thaliana	AT4G19420.2	0.714	Pectinacetylesterase family protein
Prunus persica	Prupe.5G015300.2.p	1	Pectinacetylesterase family protein
Prunus persica	Prupe.5G015300.1.p	1	Pectinacetylesterase family protein
Pyrus x bretschneideri	Pbr006792.1	1	-
Rosa multiflora	Rmu_sc0004651.1_g000001.1	1	-
Fragaria vesca	mrna27697.1	1	Pectinacetylesterase family protein
Vitis vinifera	GSVIVT01036914001	1	Pectinacetylesterase family protein
Populus trichocarpa	Potri.004G234100.1	1	Pectinacetylesterase family protein
Nicotiana benthamiana	Niben101Scf10055g04006.1	1	Pectinacetylesterase family protein LENGTH=397
Zea mays	GRMZM6G220418_P01	1	Carboxylic ester hydrolase

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
K19882	O-palmitoleoyl-L-serine hydrolase	EC:3.1.1.98

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	6.1385
SRR5252888	dormant buds	no	dormant buds(0 month)	4.97892
SRR5252889	dormant buds	no	dormant buds(0 month)	4.15698
SRR5252886	dormant buds	no	dormant buds(1 months)	2.27918
SRR5252887	dormant buds	no	dormant buds(1 months)	1.51395
SRR5252884	dormant buds	no	dormant buds(2 months)	1.7408
SRR5252882	dormant buds	no	dormant buds(3 months)	1.55194
SRR5252883	dormant buds	no	dormant buds(3 months)	4.80906
SRR5252880	dormant buds	no	dormant buds(4 months)	14.4236
SRR5252881	dormant buds	no	dormant buds(4 months)	16.4931
SRR5252878	bud break	no	bud break	17.5481
SRR5252879	bud break	no	bud break	13.2578
SRR3744766	flower	no	mature	13.5787
SRR3744767	flower	no	mature	12.8491
SRR3744768	flower	no	mature	15.064
SRR6308190	stigmas	no	open flowers	11.1165
SRR6308181	styles	no	open flowers	16.8696
SRR6308188	filaments	no	open flowers	3.98726
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	4.01296
SRR6308192	pollen	no	open flowers	1.16973
SRR6308191	petals	no	open flowers	4.1763
SRR6308194	sepals	no	open flowers	1.23898
SRR6308193	receptacles	no	open flowers	2.96439
SRR6308189	ovaries	no	open flowers	9.15588
SRR3384922	fruit	no	1 week after full bloom	4.63098
SRR3384921	fruit	no	2 week after full bloom	7.02768
SRR3384920	fruit	no	3 week after full bloom	3.63491
SRR3384919	fruit	no	4 week after full bloom	4.59742
SRR3384923	fruit	no	5 week after full bloom	3.19354
SRR3384918	fruit	no	6 week after full bloom	6.47531
SRR3384917	fruit	no	8 week after full bloom	10.143
SRR3384916	fruit	no	10 week after full bloom	8.49335
SRR3384915	fruit	no	12 week after full bloom	5.35334
SRR3384914	fruit	no	14 week after full bloom	8.74437
SRR3384913	fruit	no	16 week after full bloom	7.24177
SRR3384912	fruit	no	18 week after full bloom	6.79603
SRR3384911	fruit	no	19 week after full bloom	5.84223
SRR3384910	fruit	no	20 week after full bloom	11.8327
SRR768128	whole fruit	no	25 days post anthesis	4.26499
SRR768129	whole fruit	no	35 days post anthesis	2.40184
SRR768130	whole fruit	no	60 days post anthesis	2.31548
SRR768131	whole fruit	no	87 days post anthesis	2.6522
SRR7343308	immature fruit flesh	no	immature	8.58114
SRR7343309	immature fruit flesh	no	immature	8.02638
SRR6320494	ripe fruit flesh	no	mature	55.2341
SRR5405143	ripe fruit peel	no	mature	88.0966
SRR6320572	ripe fruit peel	no	mature	75.8729
SRR7403504	fruit	uninfected	mature	23.858
SRR7403506	fruit	uninfected	mature	27.2006
SRR7403507	fruit	uninfected	mature	24.6096
SRR7403500	fruit	infected with penicillium expansum	mature	0.32591
SRR7403501	fruit	infected with penicillium expansum	mature	0.193457
SRR7403508	fruit	infected with penicillium expansum	mature	0.488117
SRR7403502	fruit	infected with penicillium expansum	mature	0.161737
SRR7403503	fruit	infected with penicillium expansum	mature	0.722587
SRR7403505	fruit	infected with penicillium expansum	mature	0.649519
SRR1613973	Central seeds	no	20DAPF	2.03447
SRR1613974	Central seeds	no	20DAPF	3.41045
SRR1613975	Central seeds	no	20DAPF	2.71994
SRR1613976	Lateral seeds	no	20DAPF	2.83441
SRR1613977	Lateral seeds	no	20DAPF	2.57096
SRR1613978	Lateral seeds	no	20DAPF	2.36392
SRR3744786	stem	no	mature	72.7449
SRR3744787	stem	no	mature	71.2164
SRR3744772	stem	no	mature	76.8433
SRX765691	seedling shoot apex	no	4-6 week old seedling	3.49388
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	5.14576
SRR1089478	leaf	Virus-free	plantlets	6.81424
SRR1089477	leaf	ASGV-infected	plantlets	8.19967
SRR767660	leaf	uninfected	fully developed	7.17888
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	4.19391
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	12.5784
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	5.72427
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.96178
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	3.62385
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	5.98892
SRR6308182	young leaf	no	immature leaves	6.75022
SRR3744769	leaf	no	mature	27.5688
SRR3744770	leaf	no	mature	25.9649
SRR3744771	leaf	no	mature	27.8961
SRR5405145	leaf	no	mature	10.5697
SRR6320561	leaf	no	mature	6.87472