Gene detail

Detail information of MD06G1103900 Annotation

Gene ID	Annotation
MD06G1103900	NAD(P)-binding Rossmann-fold superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD06G1103900	mRNA	Chr06	24184052	24186455	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.5G116400.1.p	1	NAD(P)-binding Rossmann-fold superfamily protein
Pyrus x bretschneideri	Pbr014158.1	1	-
Rosa multiflora	Rmu_sc0002381.1_g000008.1	1	-
Rubus occidentalis	Ro05_G22568	1	-
Fragaria vesca	mrna32066.1	1	NAD(P)-binding Rossmann-fold superfamily protein
Vitis vinifera	GSVIVT01019510001	1	-
Populus trichocarpa	Potri.003G138400.1	1	dihydroflavonol 4-reductase
Oryza sativa	LOC_Os07g40986.1	0.66	"NAD dependent epimerase/dehydratase family protein, putative, expressed"
Oryza sativa	LOC_Os06g44180.1	1	"NAD dependent epimerase/dehydratase family protein, putative, expressed"
Oryza sativa	LOC_Os07g40974.1	1	"NAD dependent epimerase/dehydratase family protein, putative, expressed"
Zea mays	GRMZM5G881887_P01	1	NADPH HC toxin reductase

Gene Ontology

GO term	Description	Category
GO:0050662	coenzyme binding	molecular_function
GO:0044237	cellular metabolic process	biological_process
GO:0003824	catalytic activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	7.91479
SRR5252888	dormant buds	no	dormant buds(0 month)	0.217466
SRR5252889	dormant buds	no	dormant buds(0 month)	0
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0.0978654
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0.156751
SRR5252883	dormant buds	no	dormant buds(3 months)	0.256211
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0
SRR5252878	bud break	no	bud break	0.467454
SRR5252879	bud break	no	bud break	0.259178
SRR3744766	flower	no	mature	1.19045
SRR3744767	flower	no	mature	0.985631
SRR3744768	flower	no	mature	0.965794
SRR6308190	stigmas	no	open flowers	0.865146
SRR6308181	styles	no	open flowers	0.212324
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	5.41868
SRR6308193	receptacles	no	open flowers	0.105389
SRR6308189	ovaries	no	open flowers	0
SRR3384922	fruit	no	1 week after full bloom	1.98126
SRR3384921	fruit	no	2 week after full bloom	0.714864
SRR3384920	fruit	no	3 week after full bloom	1.11902
SRR3384919	fruit	no	4 week after full bloom	0.904585
SRR3384923	fruit	no	5 week after full bloom	2.27353
SRR3384918	fruit	no	6 week after full bloom	1.43646
SRR3384917	fruit	no	8 week after full bloom	5.8266
SRR3384916	fruit	no	10 week after full bloom	4.42608
SRR3384915	fruit	no	12 week after full bloom	3.49126
SRR3384914	fruit	no	14 week after full bloom	7.80258
SRR3384913	fruit	no	16 week after full bloom	3.98817
SRR3384912	fruit	no	18 week after full bloom	3.4986
SRR3384911	fruit	no	19 week after full bloom	5.46256
SRR3384910	fruit	no	20 week after full bloom	1.22201
SRR768128	whole fruit	no	25 days post anthesis	1.76342
SRR768129	whole fruit	no	35 days post anthesis	0.677772
SRR768130	whole fruit	no	60 days post anthesis	0.324671
SRR768131	whole fruit	no	87 days post anthesis	0.977531
SRR7343308	immature fruit flesh	no	immature	1.7352
SRR7343309	immature fruit flesh	no	immature	1.73235
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.244162
SRR7403506	fruit	uninfected	mature	0.42987
SRR7403507	fruit	uninfected	mature	0.612477
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0
SRR1613974	Central seeds	no	20DAPF	0
SRR1613975	Central seeds	no	20DAPF	0
SRR1613976	Lateral seeds	no	20DAPF	0
SRR1613977	Lateral seeds	no	20DAPF	0
SRR1613978	Lateral seeds	no	20DAPF	0
SRR3744786	stem	no	mature	0.442333
SRR3744787	stem	no	mature	0.20207
SRR3744772	stem	no	mature	0.302304
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.115132
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.126763
SRR1089478	leaf	Virus-free	plantlets	1.68766
SRR1089477	leaf	ASGV-infected	plantlets	2.40002
SRR767660	leaf	uninfected	fully developed	30.8003
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	13.3581
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	16.5808
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	12.4046
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	12.6858
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	20.3658
SRR6308182	young leaf	no	immature leaves	1.06186
SRR3744769	leaf	no	mature	3.50711
SRR3744770	leaf	no	mature	3.99635
SRR3744771	leaf	no	mature	5.06111
SRR5405145	leaf	no	mature	26.8377
SRR6320561	leaf	no	mature	26.658