Gene detail

Detail information of MD06G1164700 Annotation

Gene ID	Annotation
MD06G1164700	cytochrome P450

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD06G1164700	mRNA	Chr06	30508450	30511005	+

Sequences

CDS:

MD06G1164700

GTGATTGTTGATAATTGAATTATTATTTAAATATTGATTAACATGCTTATTTATTACTAGTAATACACTATATAATTTACAAATTTGATCTTAGAAATTAATCACCTAGTGTTGCTCGTTATATATATACTTAAAAGGGGTTGAAAGTAACCTCTTTTCAAAGTCAGACTGACACTAATGCTGATGCAATCTTAGTAGACAATAGTCCAAGTACAAAATTTGCATGAAATCTAGATTCTGTGGACCCTATAGTAAATGCATCATGATGATGATACTTTATTACTTACAACCATGTATGAAACATGACAAACATATGGAGGGAGGATGCTTTCCATGCACCTCTGCATGCCTTGCTTGCTTTTTTGAGTGCTTTTCTCGGCAGTTTTTCAGGTTCCTTGCTTTTTGTTTCCTCTTTCCACTTTCCAAAGAACTTGTGCACATGTGAATTCGTATTTATTTTTTTTACTGGATTTCGGATCCATATGATCCATGGAAAAGAAATGGAAGAAGATCAGATGGGGGTGTAGACGTGGGAAATCCAACTACTTCTAAGCATTGATTATTAATTTTGTCGTGGAAGTTCTAGAGATTTGTGTCCTATATAAACCCAGCAAAACCCGGAAGTTTAAGTATTCAGACAAACCCAGCAACAAGAGCTAGAACAGCAATGGCTATTCTAGCACTTGTGTTTGAGCAGCTGCAGAAGAATGTCTTTCTTCTTCCTCTTATCATACTTTCTGCATTCATTATGTTTTCTCTTACTAAATCATCGTCCAATGGCGATGAGAAACGAAAACTCAAGTTACCACCTTCCCCACCAAGGTTGCCATTGATTGGAAACCTTCACCAGTTAGGCACATTCCCACATCAATCTCTCCATGCTCTCTCGAAAAAGTATGGCGATTTAATGCTGGTGCACCTTGGGAAAGTTCCGACTTTGATCGTTTCATCTGCAGAGATGGCCAAGGAGGTGATGAAGACGCAGGACATTGCTTTCTGCAGCCGGCCAAAAGCCACTGCTCCGGGAATATTGTTCTATGACGCTCATGATATCGCGTTTGCTCCTTACGGAGAGTACTGGAGGCAAGTTCGGAAAATATGTGTTCTTGAGCTTCTGAGTCTTAAGAGGGTGTCACAGTTTCAGTACGCGAGGGTGGAAGAGGTTTCGGAGTTGGTCGAGAAGATTCGCAAAGCGTCGAGCCTCAATGGCGGAGGTCCTATTGTTCTGAGTGATCTGCTGGTGGCAACCTCCAACAACATTATCTGCAGGTGTATTCTCGGACAGAAGTTTGAGGGCGAGGAGAACAAGTGGTTTGGAGAGGTGACAAAAGATTTGATGTGCCAACTCATGAGTTTCAGTTTTACGGATTACTTTGGTCCGAGGATGAATTGGCTCGACCGTGCCAGTGGCCACATTAAACATTTGACATCGATTTGGTCCGAGTTTGATAGGTTTTTCGACAAGTTGATTGCCGAACATCAGGCGGCAGAGAAAGAAGGCAAGCCTCGCAAGAAGGACTTCGTGGATATTCTCCTCCAAGTTCAAAAGGAGGGCAATGACTTCGAGCTCAAAAGTGACCACCTCAAAGCACTTCTGCAGGACATGTTTGTTGGAGGAAGTGATACTAGTTGGACTGCCATGATATGGTTGATGACAGAGCTTGCGAAGAATCCACGCGTGATGAAGAAAGTCCAGGAAGAGGTAAGAAGGGTGGTGGGGAACAAGGGATATGTAGATGAGAATGTTGACACCCCCCAAATGACCTACATGATATGTTGCATCAAAGAAAATATGAGAGTTCATCCTCCGGCGCCTCTTTTACTTCCTCGCGAAACAAGTACAGACGTGAAATTGGGACCCTACAACATCCCTGCGAAAACACAGGTGTTTGTGAGCGCATACTCGGTACAAAGGGACCCCAAAGTCTGGGACAACCCCGATGAGTTTTACCCCGAGAGGTTCGAGGAGAAGAACGTTGGTTTCGTGGGTCAGGAGTTTGAACTCATCCCGTTCGGTGCTGGGAGAAGGGTGTGCCCTGGACTCGGCTTTGGGGTTGCTTCTGCTGAATATGTGCTTTCCAACCTTCTGTATTGGTTTGATTGGAAACTGCCTAGTGGTGGTAAGGAATTGGCCGAGACCATGGACACCGATGAAGTTTACGGACTCACAGTCCACAAGAAAGCTTCTCTTAACCTTATCCCGGTCCCATACAACCCTTGATCCCTCCATCGAGATCTGTCGTTCTTATATATGTTTTTTATTAGTTTTGTTGGTTGTTTCTGCTGCGCCTAAATATGCATTAGCAATTCTGCACTTGACAATGTTGTAATCCTCTACGGGACGTAATGTGACCGTGTAGAAATTGTAGCAGAAACATAGTTTTTGATAATAAAACTTATTACAGCTGTCGTAATTCGCTTTGAATATTT

Protein:

Gene family

Gene family	Subfamily
Cytochrome P450 Family	CYP71AN

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.5G163700.1.p	1	"cytochrome P450, family 71, subfamily A, polypeptide 25"
Prunus persica	Prupe.5G163800.1.p	0.815	"cytochrome P450, family 71, subfamily A, polypeptide 20"
Prunus persica	Prupe.5G164100.1.p	0.765	"cytochrome P450, family 71, subfamily A, polypeptide 20"
Pyrus communis	PCP006202.1	1	-
Pyrus x bretschneideri	Pbr024039.1	1	-

Gene Ontology

GO term	Description	Category
GO:0020037	heme binding	molecular_function
GO:0055114	oxidation-reduction process	biological_process
GO:0005506	iron ion binding	molecular_function
GO:0009055	electron carrier activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.18	p450	47	489	1.20E-100

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	288.968
SRR5252888	dormant buds	no	dormant buds(0 month)	0.799103
SRR5252889	dormant buds	no	dormant buds(0 month)	2.12144
SRR5252886	dormant buds	no	dormant buds(1 months)	2.79153
SRR5252887	dormant buds	no	dormant buds(1 months)	1.07885
SRR5252884	dormant buds	no	dormant buds(2 months)	2.72797
SRR5252882	dormant buds	no	dormant buds(3 months)	2.23201
SRR5252883	dormant buds	no	dormant buds(3 months)	1.41222
SRR5252880	dormant buds	no	dormant buds(4 months)	3.44912
SRR5252881	dormant buds	no	dormant buds(4 months)	3.11056
SRR5252878	bud break	no	bud break	3.93643
SRR5252879	bud break	no	bud break	3.13491
SRR3744766	flower	no	mature	4.59046
SRR3744767	flower	no	mature	4.52034
SRR3744768	flower	no	mature	4.78799
SRR6308190	stigmas	no	open flowers	0.460248
SRR6308181	styles	no	open flowers	0.84199
SRR6308188	filaments	no	open flowers	0.742499
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.190612
SRR6308194	sepals	no	open flowers	2.21655
SRR6308193	receptacles	no	open flowers	0.88394
SRR6308189	ovaries	no	open flowers	0.998122
SRR3384922	fruit	no	1 week after full bloom	1.81981
SRR3384921	fruit	no	2 week after full bloom	1.71449
SRR3384920	fruit	no	3 week after full bloom	1.86295
SRR3384919	fruit	no	4 week after full bloom	1.42435
SRR3384923	fruit	no	5 week after full bloom	0.620835
SRR3384918	fruit	no	6 week after full bloom	1.16233
SRR3384917	fruit	no	8 week after full bloom	1.45134
SRR3384916	fruit	no	10 week after full bloom	1.62027
SRR3384915	fruit	no	12 week after full bloom	0.801692
SRR3384914	fruit	no	14 week after full bloom	1.58886
SRR3384913	fruit	no	16 week after full bloom	0.398172
SRR3384912	fruit	no	18 week after full bloom	0.149466
SRR3384911	fruit	no	19 week after full bloom	0.322549
SRR3384910	fruit	no	20 week after full bloom	0.280608
SRR768128	whole fruit	no	25 days post anthesis	4.34697
SRR768129	whole fruit	no	35 days post anthesis	0.624586
SRR768130	whole fruit	no	60 days post anthesis	2.31875
SRR768131	whole fruit	no	87 days post anthesis	1.85795
SRR7343308	immature fruit flesh	no	immature	0.795888
SRR7343309	immature fruit flesh	no	immature	1.58769
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0.110834
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.0374658
SRR7403506	fruit	uninfected	mature	0.0791542
SRR7403507	fruit	uninfected	mature	0.0469911
SRR7403500	fruit	infected with penicillium expansum	mature	0.290497
SRR7403501	fruit	infected with penicillium expansum	mature	0.359242
SRR7403508	fruit	infected with penicillium expansum	mature	0.155385
SRR7403502	fruit	infected with penicillium expansum	mature	0.200225
SRR7403503	fruit	infected with penicillium expansum	mature	0.134181
SRR7403505	fruit	infected with penicillium expansum	mature	0.120613
SRR1613973	Central seeds	no	20DAPF	0.322688
SRR1613974	Central seeds	no	20DAPF	0.394893
SRR1613975	Central seeds	no	20DAPF	0.216333
SRR1613976	Lateral seeds	no	20DAPF	0.29681
SRR1613977	Lateral seeds	no	20DAPF	0.269788
SRR1613978	Lateral seeds	no	20DAPF	0.404235
SRR3744786	stem	no	mature	5.52247
SRR3744787	stem	no	mature	5.5526
SRR3744772	stem	no	mature	5.94782
SRX765691	seedling shoot apex	no	4-6 week old seedling	6.44036
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	8.97133
SRR1089478	leaf	Virus-free	plantlets	14.4847
SRR1089477	leaf	ASGV-infected	plantlets	11.2357
SRR767660	leaf	uninfected	fully developed	20.1689
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	7.50696
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	13.5341
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	6.81074
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0.82735
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	6.616
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	11.3996
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	7.05839
SRR6308182	young leaf	no	immature leaves	5.77529
SRR3744769	leaf	no	mature	135.695
SRR3744770	leaf	no	mature	130.084
SRR3744771	leaf	no	mature	129.859
SRR5405145	leaf	no	mature	14.6625
SRR6320561	leaf	no	mature	11.3459