Detail information of MD06G1173500 Annotation
Gene IDAnnotation
MD06G1173500Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0279alpha-1
ATP-dependent RNA helicase [EC:3.6.4.13]

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD06G1173500mRNAChr063133206631333682-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT3G06040.21Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Arabidopsis thalianaAT3G06040.31Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Arabidopsis thalianaAT3G06040.11Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Prunus persicaPrupe.5G173000.3.p1Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Prunus persicaPrupe.5G173000.2.p1Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Prunus persicaPrupe.5G173000.1.p1Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Pyrus communisPCP006655.11-
Rosa multifloraRmu_sc0011510.1_g000006.11-
Rubus occidentalisRo05_G121661-
Fragaria vescamrna32188.11Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Solanum lycopersicumSolyc09g010030.1.11Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Populus trichocarpaPotri.015G077200.11Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Nicotiana benthamianaNiben101Scf13856g00022.1150S ribosomal protein L7/L12
Nicotiana benthamianaNiben101Scf19719g01003.10.85550S ribosomal protein L7/L12
Oryza sativaLOC_Os02g10540.11"ribosomal protein L7/L12 C-terminal domain containing protein, expressed"
Zea maysGRMZM2G311914_P01160S ribosomal protein L7/L12 isoform 1; 60S ribosomal protein L7/L12 isoform 2;
Zea maysGRMZM2G117700_P010.778-

Gene Ontology
GO termDescriptionCategory
GO:0003735structural constituent of ribosomemolecular_function
GO:0005840ribosomecellular component
GO:0006412translationbiological_process

KEGG
KODescriptionEnzyme
K02935large subunit ribosomal protein L7/L12-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00542.15Ribosomal_L121261913.90E-26


Expression pattern
TOP