Gene detail

Detail information of MD06G1174200 Annotation

Gene ID	Annotation
MD06G1174200	myb domain protein 66

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD06G1174200	mRNA	Chr06	31441554	31443721	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT5G14750.1	1	ATMYB66;MYB66;WER;WER1\|myb domain protein 66;WEREWOLF;WEREWOLF 1
Pyrus communis	PCP006658.1	1	-
Vitis vinifera	GSVIVT01007740001	1	myb domain protein 66
Populus trichocarpa	Potri.012G080400.1	1	myb domain protein 66

Gene Ontology

GO term	Description	Category
GO:0003677	DNA binding	molecular_function
GO:0003682	chromatin binding	molecular_function

KEGG

KO	Description	Enzyme
K09422	"transcription factor MYB, plant"	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.27	Myb_DNA-binding	10	57	2.10E-14
PF00249.27	Myb_DNA-binding	63	108	7.70E-18

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	4.76297
SRR5252888	dormant buds	no	dormant buds(0 month)	2.34602
SRR5252889	dormant buds	no	dormant buds(0 month)	1.89418
SRR5252886	dormant buds	no	dormant buds(1 months)	0.903076
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0.459837
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0.920545
SRR5252881	dormant buds	no	dormant buds(4 months)	0.766325
SRR5252878	bud break	no	bud break	2.90348
SRR5252879	bud break	no	bud break	5.16838
SRR3744766	flower	no	mature	0.583426
SRR3744767	flower	no	mature	0.397754
SRR3744768	flower	no	mature	0.229394
SRR6308190	stigmas	no	open flowers	0.121268
SRR6308181	styles	no	open flowers	0.104174
SRR6308188	filaments	no	open flowers	1.88111
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	1.60547
SRR6308194	sepals	no	open flowers	0.129681
SRR6308193	receptacles	no	open flowers	0.517053
SRR6308189	ovaries	no	open flowers	0.588019
SRR3384922	fruit	no	1 week after full bloom	2.44682
SRR3384921	fruit	no	2 week after full bloom	1.40217
SRR3384920	fruit	no	3 week after full bloom	0.137181
SRR3384919	fruit	no	4 week after full bloom	0.887147
SRR3384923	fruit	no	5 week after full bloom	0.723145
SRR3384918	fruit	no	6 week after full bloom	0.268336
SRR3384917	fruit	no	8 week after full bloom	0.193704
SRR3384916	fruit	no	10 week after full bloom	0.125819
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0.14438
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0.0797944
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	0.951293
SRR768129	whole fruit	no	35 days post anthesis	0.759753
SRR768130	whole fruit	no	60 days post anthesis	0
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0.425419
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	4.62645
SRR1613974	Central seeds	no	20DAPF	4.12025
SRR1613975	Central seeds	no	20DAPF	4.13548
SRR1613976	Lateral seeds	no	20DAPF	2.52173
SRR1613977	Lateral seeds	no	20DAPF	3.42603
SRR1613978	Lateral seeds	no	20DAPF	2.81847
SRR3744786	stem	no	mature	0.0333508
SRR3744787	stem	no	mature	0.165047
SRR3744772	stem	no	mature	0.0658446
SRX765691	seedling shoot apex	no	4-6 week old seedling	4.01067
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	5.61032
SRR1089478	leaf	Virus-free	plantlets	0.689776
SRR1089477	leaf	ASGV-infected	plantlets	0.856083
SRR767660	leaf	uninfected	fully developed	2.51779
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	8.33031
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.71396
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	1.80719
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.713487
SRR6308182	young leaf	no	immature leaves	3.9073
SRR3744769	leaf	no	mature	0.23827
SRR3744770	leaf	no	mature	0.251528
SRR3744771	leaf	no	mature	0.283415
SRR5405145	leaf	no	mature	1.47603
SRR6320561	leaf	no	mature	1.98407