Gene detail

Detail information of MD07G1116600 Annotation

Gene ID	Annotation
MD07G1116600	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0623	detection of temperature stimulus regulation of DNA methylation HTA histone H2A chromatin remodeling nucleosome chlorophyllase [EC:3.1.1.14] ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12] UCH

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD07G1116600	mRNA	Chr07	14184587	14184982	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G00165.2	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Arabidopsis thaliana	AT4G00165.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Prunus persica	Prupe.2G139600.1.p	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Pyrus communis	PCP036322.1	1	-
Pyrus x bretschneideri	Pbr018487.1	1	-
Rosa multiflora	Rmu_sc0000827.1_g000014.1	1	-
Rosa multiflora	Rmu_sc0002914.1_g000025.1	0.946	-
Rubus occidentalis	Ro07_G13618	1	-
Fragaria vesca	mrna03948.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Vitis vinifera	GSVIVT01027641001	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Solanum lycopersicum	Solyc01g090970.2.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Populus trichocarpa	Potri.014G059800.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Nicotiana benthamiana	Niben101Scf03337g03012.1	1	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein LENGTH=128
Nicotiana benthamiana	Niben101Scf04714g00004.1	0.885	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein LENGTH=128

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14547.2	Hydrophob_seed	47	131	8.50E-26

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	43.6003
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	0
SRR5252886	dormant buds	no	dormant buds(1 months)	2.06131
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0.477951
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0
SRR5252878	bud break	no	bud break	3.48806
SRR5252879	bud break	no	bud break	4.35137
SRR3744766	flower	no	mature	0
SRR3744767	flower	no	mature	0
SRR3744768	flower	no	mature	0.425027
SRR6308190	stigmas	no	open flowers	0.620084
SRR6308181	styles	no	open flowers	4.71383
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	9.62098
SRR6308191	petals	no	open flowers	10.1772
SRR6308194	sepals	no	open flowers	2.63793
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	6.34185
SRR3384922	fruit	no	1 week after full bloom	1.64479
SRR3384921	fruit	no	2 week after full bloom	3.56078
SRR3384920	fruit	no	3 week after full bloom	10.1898
SRR3384919	fruit	no	4 week after full bloom	4.34487
SRR3384923	fruit	no	5 week after full bloom	1.37731
SRR3384918	fruit	no	6 week after full bloom	3.83308
SRR3384917	fruit	no	8 week after full bloom	6.64077
SRR3384916	fruit	no	10 week after full bloom	4.67291
SRR3384915	fruit	no	12 week after full bloom	0.850606
SRR3384914	fruit	no	14 week after full bloom	4.9498
SRR3384913	fruit	no	16 week after full bloom	2.91502
SRR3384912	fruit	no	18 week after full bloom	2.27966
SRR3384911	fruit	no	19 week after full bloom	0.437292
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	8.17198
SRR768129	whole fruit	no	35 days post anthesis	4.75096
SRR768130	whole fruit	no	60 days post anthesis	6.19534
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	1.28531
SRR1613974	Central seeds	no	20DAPF	1.92663
SRR1613975	Central seeds	no	20DAPF	2.83367
SRR1613976	Lateral seeds	no	20DAPF	0.687843
SRR1613977	Lateral seeds	no	20DAPF	0.532103
SRR1613978	Lateral seeds	no	20DAPF	1.01826
SRR3744786	stem	no	mature	0
SRR3744787	stem	no	mature	0
SRR3744772	stem	no	mature	0
SRX765691	seedling shoot apex	no	4-6 week old seedling	9.67
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	40.0037
SRR1089478	leaf	Virus-free	plantlets	2.25652
SRR1089477	leaf	ASGV-infected	plantlets	5.25108
SRR767660	leaf	uninfected	fully developed	97.7297
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	33.0701
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	123.728
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	225.609
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	15.255
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	15.2529
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	8.71352
SRR6308182	young leaf	no	immature leaves	20.621
SRR3744769	leaf	no	mature	0.655108
SRR3744770	leaf	no	mature	0
SRR3744771	leaf	no	mature	0.492976
SRR5405145	leaf	no	mature	1.3761
SRR6320561	leaf	no	mature	5.68834