Detail information of MD07G1120500 Annotation
Gene IDAnnotation
MD07G1120500ribosomal protein S13A

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD07G1120500mRNAChr071506336715065948-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT4G00100.11ATRPS13A;PFL2;RPS13;RPS13A|ribosomal protein S13A;POINTED FIRST LEAF 2;
Arabidopsis thalianaAT3G60770.10.867Ribosomal protein S13/S15
Prunus persicaPrupe.4G286400.1.p1ribosomal protein S13A
Pyrus communisPCP032932.11-
Pyrus x bretschneideriPbr041392.11-
Pyrus x bretschneideriPbr029177.11-
Rosa multifloraRmu_sc0003674.1_g000017.11-
Rubus occidentalisRo02_G355801-
Fragaria vescamrna19420.11ribosomal protein S13A
Vitis viniferaGSVIVT010276370011ribosomal protein S13A
Solanum lycopersicumSolyc05g051000.2.10.75ribosomal protein S13A
Solanum lycopersicumSolyc03g083530.2.11ribosomal protein S13A
Solanum lycopersicumSolyc11g072260.1.11ribosomal protein S13A
Solanum lycopersicumSolyc01g091220.2.11ribosomal protein S13A
Solanum lycopersicumSolyc10g018250.1.11ribosomal protein S13A
Populus trichocarpaPotri.015G130000.11ribosomal protein S13A
Populus trichocarpaPotri.002G146800.11Ribosomal protein S13/S15
Nicotiana benthamianaNiben101Scf12414g01019.1140S ribosomal protein S13
Nicotiana benthamianaNiben101Scf00603g08024.1140S ribosomal protein S13
Nicotiana benthamianaNiben101Scf11361g00001.1140S ribosomal protein S13
Nicotiana benthamianaNiben101Scf00527g01005.1140S ribosomal protein S13
Nicotiana benthamianaNiben101Scf07532g02017.1140S ribosomal protein S13
Nicotiana benthamianaNiben101Scf02494g08002.1140S ribosomal protein S13
Nicotiana benthamianaNiben101Scf06236g01011.10.62540S ribosomal protein S13
Oryza sativaLOC_Os08g02400.10.914"40S ribosomal protein S13, putative, expressed"
Oryza sativaLOC_Os08g02410.11"40S ribosomal protein S13, putative, expressed"
Zea maysGRMZM2G158034_P01140S ribosomal protein S13

Gene Ontology
GO termDescriptionCategory
GO:0003735structural constituent of ribosomemolecular_function
GO:0005840ribosomecellular component
GO:0006412translationbiological_process

KEGG
KODescriptionEnzyme
K02953small subunit ribosomal protein S13e-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF08069.8Ribosomal_S13_N1602.20E-32
PF00312.18Ribosomal_S15741465.80E-16


Expression pattern
TOP