| Gene ID | Annotation |
|---|---|
| MD07G1127800 | 26S proteasome |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0444 | phenylalanine-tRNA ligase complex tRNA (guanine-N2-)-methyltransferase activity trans-octaprenyltranstransferase activity phenylalanine-tRNA ligase activity RNA binding phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] geranyl diphosphate synthase [EC:2.5.1.1] tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] dimethylallyltranstransferase activity |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD07G1127800 | mRNA | Chr07 | 18152208 | 18156666 | - |
| CDS: |
| MD07G1127800 |
| Protein: |
| MD07G1127800 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT3G61140.1 | 1 | AtCSN1;ATFUS6;ATSK31;COP11;CSN1;EMB78;FUS6;SK31|ARABIDOPSIS THALIANA FUSCA 6;SHAGGY-LIKE KINASE 31;CONSTITUTIVE PHOTOMORPHOGENIC 11;COP9 SIGNALOSOME SUBUNIT 1;EMBRYO DEFECTIVE 78;FUSCA 6 |
| Prunus persica | Prupe.2G156700.1.p | 1 | "26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain" |
| Pyrus communis | PCP013926.1 | 1 | - |
| Pyrus x bretschneideri | Pbr036139.1 | 1 | - |
| Rosa multiflora | Rmu_sc0005118.1_g000005.1 | 1 | - |
| Rubus occidentalis | Ro07_G21655 | 1 | - |
| Fragaria vesca | mrna19132.1 | 1 | "26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain" |
| Vitis vinifera | GSVIVT01027510001 | 1 | "26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain" |
| Populus trichocarpa | Potri.002G154500.1 | 1 | "26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain" |
| Nicotiana benthamiana | Niben101Scf15067g04023.1 | 1 | COP9 signalosome complex subunit 1 |
| Nicotiana benthamiana | Niben101Scf01909g01002.1 | 0.768 | COP9 signalosome complex subunit 1 |
| Oryza sativa | LOC_Os03g02540.1 | 1 | "proteasome subunit, putative, expressed" |
| Zea mays | GRMZM2G062210_P01 | 1 | COP9 signalosome complex subunit 1 |
| GO term | Description | Category |
|---|---|---|
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |