Gene detail

Detail information of MD07G1143600 Annotation

Gene ID	Annotation
MD07G1143600	GDSL-like Lipase/Acylhydrolase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0075	anchored component of plasma membrane leucocyanidin oxygenase activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD07G1143600	mRNA	Chr07	20927427	20930380	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G01130.1	1	GDSL-like Lipase/Acylhydrolase superfamily protein
Prunus persica	Prupe.2G182700.1.p	1	GDSL-like Lipase/Acylhydrolase superfamily protein
Pyrus communis	PCP018387.1	1	-
Rosa multiflora	Rmu_sc0001609.1_g000017.1	1	-
Rubus occidentalis	Ro07_G19637	1	-
Fragaria vesca	mrna18929.1	1	GDSL-like Lipase/Acylhydrolase superfamily protein
Vitis vinifera	GSVIVT01027038001	1	GDSL-like Lipase/Acylhydrolase superfamily protein
Solanum lycopersicum	Solyc01g095450.2.1	1	GDSL-like Lipase/Acylhydrolase superfamily protein
Populus trichocarpa	Potri.014G094100.1	1	GDSL-like Lipase/Acylhydrolase superfamily protein
Nicotiana benthamiana	Niben101Scf01990g00003.1	1	GDSL esterase/lipase
Oryza sativa	LOC_Os06g06520.1	1	"GDSL-like lipase/acylhydrolase, putative, expressed"

Gene Ontology

GO term	Description	Category
GO:0006629	lipid metabolic process	biological_process
GO:0016787	hydrolase activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.24995
SRR5252888	dormant buds	no	dormant buds(0 month)	2.50136
SRR5252889	dormant buds	no	dormant buds(0 month)	0.827912
SRR5252886	dormant buds	no	dormant buds(1 months)	0.907852
SRR5252887	dormant buds	no	dormant buds(1 months)	1.3669
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0.515145
SRR5252883	dormant buds	no	dormant buds(3 months)	0.77184
SRR5252880	dormant buds	no	dormant buds(4 months)	0.514118
SRR5252881	dormant buds	no	dormant buds(4 months)	0.927306
SRR5252878	bud break	no	bud break	3.71256
SRR5252879	bud break	no	bud break	4.18781
SRR3744766	flower	no	mature	0.162166
SRR3744767	flower	no	mature	0.236674
SRR3744768	flower	no	mature	0.262111
SRR6308190	stigmas	no	open flowers	3.26363
SRR6308181	styles	no	open flowers	1.75339
SRR6308188	filaments	no	open flowers	0.263547
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	1.01299
SRR6308194	sepals	no	open flowers	1.41817
SRR6308193	receptacles	no	open flowers	1.30494
SRR6308189	ovaries	no	open flowers	1.13099
SRR3384922	fruit	no	1 week after full bloom	5.60656
SRR3384921	fruit	no	2 week after full bloom	5.67722
SRR3384920	fruit	no	3 week after full bloom	6.89503
SRR3384919	fruit	no	4 week after full bloom	12.8461
SRR3384923	fruit	no	5 week after full bloom	11.6108
SRR3384918	fruit	no	6 week after full bloom	5.95683
SRR3384917	fruit	no	8 week after full bloom	4.46233
SRR3384916	fruit	no	10 week after full bloom	6.79823
SRR3384915	fruit	no	12 week after full bloom	9.9142
SRR3384914	fruit	no	14 week after full bloom	5.26123
SRR3384913	fruit	no	16 week after full bloom	6.98036
SRR3384912	fruit	no	18 week after full bloom	2.54007
SRR3384911	fruit	no	19 week after full bloom	4.35956
SRR3384910	fruit	no	20 week after full bloom	1.00395
SRR768128	whole fruit	no	25 days post anthesis	8.0492
SRR768129	whole fruit	no	35 days post anthesis	8.20216
SRR768130	whole fruit	no	60 days post anthesis	10.0134
SRR768131	whole fruit	no	87 days post anthesis	4.42179
SRR7343308	immature fruit flesh	no	immature	2.84992
SRR7343309	immature fruit flesh	no	immature	8.88868
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0.106031
SRR7403507	fruit	uninfected	mature	0.0419645
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0.0925088
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0.0718072
SRR1613973	Central seeds	no	20DAPF	0.305522
SRR1613974	Central seeds	no	20DAPF	0.246942
SRR1613975	Central seeds	no	20DAPF	0.3185
SRR1613976	Lateral seeds	no	20DAPF	0.423183
SRR1613977	Lateral seeds	no	20DAPF	0.47059
SRR1613978	Lateral seeds	no	20DAPF	0.39154
SRR3744786	stem	no	mature	0.639597
SRR3744787	stem	no	mature	0.302684
SRR3744772	stem	no	mature	0.43911
SRX765691	seedling shoot apex	no	4-6 week old seedling	6.07349
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	3.58829
SRR1089478	leaf	Virus-free	plantlets	5.55632
SRR1089477	leaf	ASGV-infected	plantlets	2.96311
SRR767660	leaf	uninfected	fully developed	3.87413
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	4.05918
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	4.32422
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	6.06656
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	3.20521
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	1.77377
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	1.94602
SRR6308182	young leaf	no	immature leaves	2.33781
SRR3744769	leaf	no	mature	0.454484
SRR3744770	leaf	no	mature	0.179597
SRR3744771	leaf	no	mature	0.294915
SRR5405145	leaf	no	mature	3.29946
SRR6320561	leaf	no	mature	3.9404