| Gene ID | Annotation |
|---|---|
| MD07G1193500 | IKI3 family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0371 | cell cycle checkpoint control protein RAD9A [EC:3.1.11.2] N-terminal acetyltransferase B complex non-catalytic subunit exportin-5 elongator complex protein 1 tRNA pseudouridine synthase 10 [EC:5.4.99.-] UV excision repair protein RAD23 nucleocytoplasmic transporter activity proteasome binding nucleus ubiquitin binding regulation of leaf development regulation of DNA-templated transcription leaf morphogenesis pre-miRNA export from nucleus regulation of abscisic acid-activated signaling pathway 5-carbamoylmethyl uridine residue modification embryo sac egg cell differentiation regulation of DNA repair negative regulation of anthocyanin metabolic process fruit morphogenesis Elongator holoenzyme complex pseudouridine synthase activity tRNA modification damaged DNA binding nuclear envelope |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD07G1193500 | mRNA | Chr07 | 27325172 | 27330684 | - |
| CDS: |
| MD07G1193500 |
| Protein: |
| MD07G1193500 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT5G13680.1 | 1 | ABO1;AtELP1;ELO2|ABA-OVERLY SENSITIVE 1;;ELONGATA 2 |
| Pyrus x bretschneideri | Pbr042593.1 | 1 | - |
| Rosa multiflora | Rmu_sc0009109.1_g000005.1 | 1 | - |
| Rubus occidentalis | Ro07_G20635 | 1 | - |
| Fragaria vesca | mrna26654.1 | 1 | IKI3 family protein |
| Vitis vinifera | GSVIVT01016590001 | 1 | IKI3 family protein |
| Solanum lycopersicum | Solyc05g054630.2.1 | 1 | IKI3 family protein |
| Populus trichocarpa | Potri.010G208400.1 | 1 | IKI3 family protein |
| Nicotiana benthamiana | Niben101Scf10015g01016.1 | 1 | Elongator complex protein 1 |
| Oryza sativa | LOC_Os07g37640.1 | 1 | "IKI3 family protein, expressed" |
| Zea mays | GRMZM2G018223_P01 | 1 | IKI3 family protein |
| GO term | Description | Category |
|---|---|---|
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| K11373 | elongator complex protein 1 | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |