Gene ID | Annotation |
---|---|
MD07G1222000 | sequence-specific DNA binding transcription factors |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
-- | -- | -- |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD07G1222000 | mRNA | Chr07 | 29894544 | 29898885 | + |
CDS: |
MD07G1222000 |
Protein: |
MD07G1222000 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | NF-X1 |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Arabidopsis thaliana | AT5G05660.1 | 1 | ATNFXL2;EBI;NFXL2|Arabidopsis NF-X like 2;EARLY BIRD;NFX1-like 2 |
Prunus persica | Prupe.2G250200.1.p | 1 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
Pyrus communis | PCP013208.1 | 1 | - |
Pyrus x bretschneideri | Pbr010904.1 | 1 | - |
Vitis vinifera | GSVIVT01032817001 | 1 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
Solanum lycopersicum | Solyc06g051570.2.1 | 1 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
Solanum lycopersicum | Solyc03g118420.2.1 | 1 | NF-X-like 1 |
Populus trichocarpa | Potri.010G188700.1 | 1 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
Nicotiana benthamiana | Niben101Scf02221g01001.1 | 1 | NF-X1-type zinc finger protein NFXL1 |
Oryza sativa | LOC_Os01g06550.1 | 1 | "NF-X1-type zinc finger protein, putative, expressed" |
Zea mays | GRMZM2G139369_P01 | 1 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
GO term | Description | Category |
---|---|---|
GO:0003700 | transcription factor activity, sequence-specific DNA binding | molecular_function |
GO:0005634 | nucleus | cellular component |
GO:0008270 | zinc ion binding | molecular_function |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
-- | -- | -- | -- | -- |