Gene detail

Detail information of MD07G1250800 Annotation

Gene ID	Annotation
MD07G1250800	GroES-like zinc-binding alcohol dehydrogenase family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD07G1250800	mRNA	Chr07	31925443	31928117	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP001961.1	1	-
Pyrus x bretschneideri	Pbr012701.1	1	-
Vitis vinifera	GSVIVT01017501001	1	GroES-like zinc-binding alcohol dehydrogenase family protein
Nicotiana benthamiana	Niben101Scf08293g00001.1	1	Quinone oxidoreductase
Oryza sativa	LOC_Os10g41170.1	1	"dehydrogenase, putative, expressed"

Gene Ontology

GO term	Description	Category
GO:0055114	oxidation-reduction process	biological_process
GO:0008270	zinc ion binding	molecular_function
GO:0016491	oxidoreductase activity	molecular_function

KEGG

KO	Description	Enzyme
K00344	NADPH2:quinone reductase	EC:1.6.5.5

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08240.8	ADH_N	29	87	2.90E-07

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	94.9449
SRR5252888	dormant buds	no	dormant buds(0 month)	17.4768
SRR5252889	dormant buds	no	dormant buds(0 month)	30.6954
SRR5252886	dormant buds	no	dormant buds(1 months)	11.2993
SRR5252887	dormant buds	no	dormant buds(1 months)	14.8844
SRR5252884	dormant buds	no	dormant buds(2 months)	15.9369
SRR5252882	dormant buds	no	dormant buds(3 months)	14.3584
SRR5252883	dormant buds	no	dormant buds(3 months)	27.5279
SRR5252880	dormant buds	no	dormant buds(4 months)	15.2761
SRR5252881	dormant buds	no	dormant buds(4 months)	22.7328
SRR5252878	bud break	no	bud break	15.2154
SRR5252879	bud break	no	bud break	9.18269
SRR3744766	flower	no	mature	8.53881
SRR3744767	flower	no	mature	7.45426
SRR3744768	flower	no	mature	8.03727
SRR6308190	stigmas	no	open flowers	15.0022
SRR6308181	styles	no	open flowers	15.9329
SRR6308188	filaments	no	open flowers	9.96995
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	9.98864
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	5.43952
SRR6308194	sepals	no	open flowers	10.7736
SRR6308193	receptacles	no	open flowers	27.7853
SRR6308189	ovaries	no	open flowers	16.7826
SRR3384922	fruit	no	1 week after full bloom	28.7876
SRR3384921	fruit	no	2 week after full bloom	31.504
SRR3384920	fruit	no	3 week after full bloom	107.816
SRR3384919	fruit	no	4 week after full bloom	44.1641
SRR3384923	fruit	no	5 week after full bloom	69.0261
SRR3384918	fruit	no	6 week after full bloom	43.3852
SRR3384917	fruit	no	8 week after full bloom	52.8233
SRR3384916	fruit	no	10 week after full bloom	48.8889
SRR3384915	fruit	no	12 week after full bloom	64.6656
SRR3384914	fruit	no	14 week after full bloom	66.0239
SRR3384913	fruit	no	16 week after full bloom	37.0096
SRR3384912	fruit	no	18 week after full bloom	40.2155
SRR3384911	fruit	no	19 week after full bloom	30.4121
SRR3384910	fruit	no	20 week after full bloom	18.4792
SRR768128	whole fruit	no	25 days post anthesis	69.9235
SRR768129	whole fruit	no	35 days post anthesis	39.9423
SRR768130	whole fruit	no	60 days post anthesis	56.1568
SRR768131	whole fruit	no	87 days post anthesis	42.4811
SRR7343308	immature fruit flesh	no	immature	53.2122
SRR7343309	immature fruit flesh	no	immature	60.5931
SRR6320494	ripe fruit flesh	no	mature	34.6962
SRR5405143	ripe fruit peel	no	mature	33.0906
SRR6320572	ripe fruit peel	no	mature	47.3398
SRR7403504	fruit	uninfected	mature	20.8294
SRR7403506	fruit	uninfected	mature	19.1042
SRR7403507	fruit	uninfected	mature	19.9028
SRR7403500	fruit	infected with penicillium expansum	mature	2.00061
SRR7403501	fruit	infected with penicillium expansum	mature	2.56402
SRR7403508	fruit	infected with penicillium expansum	mature	3.21035
SRR7403502	fruit	infected with penicillium expansum	mature	2.48207
SRR7403503	fruit	infected with penicillium expansum	mature	2.0162
SRR7403505	fruit	infected with penicillium expansum	mature	1.66129
SRR1613973	Central seeds	no	20DAPF	23.146
SRR1613974	Central seeds	no	20DAPF	22.2366
SRR1613975	Central seeds	no	20DAPF	22.8934
SRR1613976	Lateral seeds	no	20DAPF	19.0478
SRR1613977	Lateral seeds	no	20DAPF	24.0063
SRR1613978	Lateral seeds	no	20DAPF	20.2529
SRR3744786	stem	no	mature	23.5163
SRR3744787	stem	no	mature	23.1841
SRR3744772	stem	no	mature	23.5856
SRX765691	seedling shoot apex	no	4-6 week old seedling	17.0553
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	38.5153
SRR1089478	leaf	Virus-free	plantlets	15.2125
SRR1089477	leaf	ASGV-infected	plantlets	13.1218
SRR767660	leaf	uninfected	fully developed	33.6929
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	3.87643
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	13.7196
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	76.533
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	18.1257
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	29.0756
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	18.0979
SRR6308182	young leaf	no	immature leaves	12.5104
SRR3744769	leaf	no	mature	12.9798
SRR3744770	leaf	no	mature	15.5446
SRR3744771	leaf	no	mature	13.485
SRR5405145	leaf	no	mature	18.65
SRR6320561	leaf	no	mature	18.3168