Gene detail

Detail information of MD07G1268400 Annotation

Gene ID	Annotation
MD07G1268400	Cytochrome b561/ferric reductase transmembrane protein family

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD07G1268400	mRNA	Chr07	33596978	33600556	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus x bretschneideri	Pbr004107.1	1	-
Pyrus x bretschneideri	Pbr013972.1	0.947	-
Rosa multiflora	Rmu_sc0010600.1_g000002.1	1	-
Rubus occidentalis	Ro07_G34723	1	-
Rubus occidentalis	Ro07_G09441	1	-
Fragaria vesca	mrna13279.1	1	Cytochrome b561/ferric reductase transmembrane protein family
Vitis vinifera	GSVIVT01028979001	1	Cytochrome b561/ferric reductase transmembrane protein family
Solanum lycopersicum	Solyc03g025840.2.1	1	Cytochrome b561/ferric reductase transmembrane protein family
Populus trichocarpa	Potri.015G143700.1	1	Cytochrome b561/ferric reductase transmembrane protein family
Nicotiana benthamiana	Niben101Scf02910g01009.1	1	Cytochrome b561
Nicotiana benthamiana	Niben101Scf04804g00002.1	0.927	Cytochrome b561
Oryza sativa	LOC_Os04g45090.2	1	"cytochrome b561, putative, expressed"
Oryza sativa	LOC_Os10g36030.1	1	"cytochrome b561, putative, expressed"
Oryza sativa	LOC_Os08g01140.1	1	"cytochrome b561, putative, expressed"

Gene Ontology

GO term	Description	Category
GO:0016021	integral component of membrane	cellular component

KEGG

KO	Description	Enzyme
K08360	cytochrome b-561	EC:1.16.5.1

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	54.4
SRR5252888	dormant buds	no	dormant buds(0 month)	11.8602
SRR5252889	dormant buds	no	dormant buds(0 month)	13.943
SRR5252886	dormant buds	no	dormant buds(1 months)	16.2937
SRR5252887	dormant buds	no	dormant buds(1 months)	18.1473
SRR5252884	dormant buds	no	dormant buds(2 months)	16.6689
SRR5252882	dormant buds	no	dormant buds(3 months)	12.9185
SRR5252883	dormant buds	no	dormant buds(3 months)	18.1136
SRR5252880	dormant buds	no	dormant buds(4 months)	8.72155
SRR5252881	dormant buds	no	dormant buds(4 months)	12.2059
SRR5252878	bud break	no	bud break	11.5196
SRR5252879	bud break	no	bud break	10.2611
SRR3744766	flower	no	mature	77.3481
SRR3744767	flower	no	mature	81.9166
SRR3744768	flower	no	mature	86.6326
SRR6308190	stigmas	no	open flowers	32.3365
SRR6308181	styles	no	open flowers	36.7044
SRR6308188	filaments	no	open flowers	16.1921
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	80.4575
SRR6308192	pollen	no	open flowers	108.743
SRR6308191	petals	no	open flowers	87.9157
SRR6308194	sepals	no	open flowers	42.5331
SRR6308193	receptacles	no	open flowers	13.972
SRR6308189	ovaries	no	open flowers	26.5076
SRR3384922	fruit	no	1 week after full bloom	54.6088
SRR3384921	fruit	no	2 week after full bloom	52.1791
SRR3384920	fruit	no	3 week after full bloom	106.639
SRR3384919	fruit	no	4 week after full bloom	75.1812
SRR3384923	fruit	no	5 week after full bloom	59.8785
SRR3384918	fruit	no	6 week after full bloom	52.3971
SRR3384917	fruit	no	8 week after full bloom	37.4649
SRR3384916	fruit	no	10 week after full bloom	27.1339
SRR3384915	fruit	no	12 week after full bloom	36.1521
SRR3384914	fruit	no	14 week after full bloom	31.1368
SRR3384913	fruit	no	16 week after full bloom	27.7419
SRR3384912	fruit	no	18 week after full bloom	29.3873
SRR3384911	fruit	no	19 week after full bloom	27.9021
SRR3384910	fruit	no	20 week after full bloom	27.4008
SRR768128	whole fruit	no	25 days post anthesis	63.2906
SRR768129	whole fruit	no	35 days post anthesis	54.383
SRR768130	whole fruit	no	60 days post anthesis	38.122
SRR768131	whole fruit	no	87 days post anthesis	29.2864
SRR7343308	immature fruit flesh	no	immature	53.6567
SRR7343309	immature fruit flesh	no	immature	66.1971
SRR6320494	ripe fruit flesh	no	mature	137.373
SRR5405143	ripe fruit peel	no	mature	52.1879
SRR6320572	ripe fruit peel	no	mature	98.3761
SRR7403504	fruit	uninfected	mature	148.57
SRR7403506	fruit	uninfected	mature	149.603
SRR7403507	fruit	uninfected	mature	144.006
SRR7403500	fruit	infected with penicillium expansum	mature	385.133
SRR7403501	fruit	infected with penicillium expansum	mature	393.871
SRR7403508	fruit	infected with penicillium expansum	mature	405.334
SRR7403502	fruit	infected with penicillium expansum	mature	405.975
SRR7403503	fruit	infected with penicillium expansum	mature	412.968
SRR7403505	fruit	infected with penicillium expansum	mature	405.263
SRR1613973	Central seeds	no	20DAPF	17.7726
SRR1613974	Central seeds	no	20DAPF	18.1611
SRR1613975	Central seeds	no	20DAPF	17.9566
SRR1613976	Lateral seeds	no	20DAPF	17.6832
SRR1613977	Lateral seeds	no	20DAPF	19.5721
SRR1613978	Lateral seeds	no	20DAPF	19.2851
SRR3744786	stem	no	mature	82.581
SRR3744787	stem	no	mature	73.9188
SRR3744772	stem	no	mature	78.3532
SRX765691	seedling shoot apex	no	4-6 week old seedling	29.9557
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	42.1248
SRR1089478	leaf	Virus-free	plantlets	21.6008
SRR1089477	leaf	ASGV-infected	plantlets	22.1648
SRR767660	leaf	uninfected	fully developed	112.746
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	127.546
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	72.6049
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	280.673
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	73.0635
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	147.726
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	113.588
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	178.529
SRR6308182	young leaf	no	immature leaves	35.188
SRR3744769	leaf	no	mature	100.512
SRR3744770	leaf	no	mature	101.679
SRR3744771	leaf	no	mature	100.437
SRR5405145	leaf	no	mature	91.7273
SRR6320561	leaf	no	mature	111.636