Gene detail

Detail information of MD07G1277100 Annotation

Gene ID	Annotation
MD07G1277100	detoxifying efflux carrier 35

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0214	receptor expression-enhancing protein 5/6 pectate lyase [EC:4.2.2.2]

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD07G1277100	mRNA	Chr07	34239274	34248789	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus x bretschneideri	Pbr010867.1	1	-
Rosa multiflora	Rmu_sc0002068.1_g000002.1	1	-
Rosa multiflora	Rmu_sc0005268.1_g000013.1	0.987	-
Fragaria vesca	mrna18992.1	1	MATE efflux family protein

Gene Ontology

GO term	Description	Category
GO:0006855	drug transmembrane transport	biological_process
GO:0016020	membrane	cellular component
GO:0015238	drug transmembrane transporter activity	molecular_function
GO:0015297	antiporter activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.0910143
SRR5252888	dormant buds	no	dormant buds(0 month)	0.275324
SRR5252889	dormant buds	no	dormant buds(0 month)	0.318948
SRR5252886	dormant buds	no	dormant buds(1 months)	0.233163
SRR5252887	dormant buds	no	dormant buds(1 months)	0.681468
SRR5252884	dormant buds	no	dormant buds(2 months)	0.0989368
SRR5252882	dormant buds	no	dormant buds(3 months)	0.694598
SRR5252883	dormant buds	no	dormant buds(3 months)	0.108126
SRR5252880	dormant buds	no	dormant buds(4 months)	1.58449
SRR5252881	dormant buds	no	dormant buds(4 months)	1.374
SRR5252878	bud break	no	bud break	1.28228
SRR5252879	bud break	no	bud break	3.0079
SRR3744766	flower	no	mature	0.0207108
SRR3744767	flower	no	mature	0.0724593
SRR3744768	flower	no	mature	0.127302
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.261477
SRR6308194	sepals	no	open flowers	0.168937
SRR6308193	receptacles	no	open flowers	0.741024
SRR6308189	ovaries	no	open flowers	0.383273
SRR3384922	fruit	no	1 week after full bloom	2.9726
SRR3384921	fruit	no	2 week after full bloom	2.916
SRR3384920	fruit	no	3 week after full bloom	1.90356
SRR3384919	fruit	no	4 week after full bloom	2.20848
SRR3384923	fruit	no	5 week after full bloom	1.98357
SRR3384918	fruit	no	6 week after full bloom	2.16482
SRR3384917	fruit	no	8 week after full bloom	0.375053
SRR3384916	fruit	no	10 week after full bloom	0.203011
SRR3384915	fruit	no	12 week after full bloom	0.28824
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	2.06952
SRR768129	whole fruit	no	35 days post anthesis	4.54529
SRR768130	whole fruit	no	60 days post anthesis	0.823849
SRR768131	whole fruit	no	87 days post anthesis	1.86035
SRR7343308	immature fruit flesh	no	immature	0.548684
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0
SRR1613974	Central seeds	no	20DAPF	0.0381251
SRR1613975	Central seeds	no	20DAPF	0.0647009
SRR1613976	Lateral seeds	no	20DAPF	0.0612512
SRR1613977	Lateral seeds	no	20DAPF	0.0394857
SRR1613978	Lateral seeds	no	20DAPF	0.0725392
SRR3744786	stem	no	mature	0
SRR3744787	stem	no	mature	0
SRR3744772	stem	no	mature	0.0210228
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.79561
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.9578
SRR1089478	leaf	Virus-free	plantlets	0.0893597
SRR1089477	leaf	ASGV-infected	plantlets	0.138631
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0.285908
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.525036
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.549041
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	3.28169
SRR3744769	leaf	no	mature	0.0435722
SRR3744770	leaf	no	mature	0
SRR3744771	leaf	no	mature	0.0451091
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0.117184