| Gene ID | Annotation |
|---|---|
| MD08G1003700 | FtsH extracellular protease family |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0477 | chloroplast thylakoid membrane chloroplast envelope thylakoid membrane organization peptide deformylase [EC:3.5.1.88] thioredoxin reductase (NADPH) [EC:1.8.1.9] protease IV [EC:3.4.21.-] molecular chaperone DnaJ cell division protease FtsH [EC:3.4.24.-] carotenoid biosynthetic process regulation of starch biosynthetic process peptide deformylase activity thioredoxin-disulfide reductase activity thylakoid lumen removal of superoxide radicals signal peptide processing regulation of chlorophyll biosynthetic process photosystem II repair isopentenyl diphosphate biosynthetic process response to light intensity |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD08G1003700 | mRNA | Chr08 | 372855 | 375798 | - |
| CDS: |
| MD08G1003700 |
| Protein: |
| MD08G1003700 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT5G42270.1 | 1 | FTSH5;VAR1|VARIEGATED 1 |
| Prunus persica | Prupe.1G355600.1.p | 1 | FtsH extracellular protease family |
| Prunus persica | Prupe.1G355600.2.p | 0.895 | FtsH extracellular protease family |
| Pyrus communis | PCP019517.1 | 1 | - |
| Pyrus x bretschneideri | Pbr005758.2 | 1 | - |
| Rosa multiflora | Rmu_ssc0000218.1_g000004.1 | 1 | - |
| Rubus occidentalis | Ro02_G10425 | 1 | - |
| Fragaria vesca | mrna08624.1 | 1 | FtsH extracellular protease family |
| Vitis vinifera | GSVIVT01008686001 | 1 | FTSH protease 1 |
| Solanum lycopersicum | Solyc04g082250.2.1 | 1 | FtsH extracellular protease family |
| Solanum lycopersicum | Solyc04g063360.2.1 | 1 | AAA-type ATPase family protein |
| Populus trichocarpa | Potri.002G012000.1 | 1 | FtsH extracellular protease family |
| Nicotiana benthamiana | Niben101Scf02175g03014.1 | 1 | ATP-dependent zinc metalloprotease FtsH |
| Nicotiana benthamiana | Niben101Scf00837g00017.1 | 1 | ATP-dependent zinc metalloprotease FtsH |
| Oryza sativa | LOC_Os06g51029.1 | 1 | "OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed" |
| Zea mays | GRMZM2G126361_P01 | 1 | - |
| GO term | Description | Category |
|---|---|---|
| GO:0016020 | membrane | cellular component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004222 | metalloendopeptidase activity | molecular_function |
| GO:0017111 | nucleoside-triphosphatase activity | molecular_function |
| GO:0030163 | protein catabolic process | biological_process |
| GO:0006508 | proteolysis | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| K03798 | cell division protease FtsH | EC:3.4.24.- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
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