Gene detail

Detail information of MD08G1064100 Annotation

Gene ID	Annotation
MD08G1064100	heat shock transcription factor A2

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0198

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD08G1064100	mRNA	Chr08	5108373	5110267	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Transcription Factors Family	HSF

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT2G26150.1	1	ATHSFA2;HSFA2\|heat shock transcription factor A2
Pyrus communis	PCP044449.1	1	-
Vitis vinifera	GSVIVT01035385001	1	heat shock transcription factor A2
Nicotiana benthamiana	Niben101Scf01777g02001.1	1	heat shock transcription factor A2 LENGTH=345
Oryza sativa	LOC_Os01g39020.1	1	"HSF-type DNA-binding domain containing protein, expressed"

Gene Ontology

GO term	Description	Category
GO:0043565	sequence-specific DNA binding	molecular_function
GO:0005634	nucleus	cellular component
GO:0009408	response to heat	biological_process
GO:0003700	transcription factor activity, sequence-specific DNA binding	molecular_function

KEGG

KO	Description	Enzyme
K09419	"heat shock transcription factor, other eukaryote"	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.71943
SRR5252888	dormant buds	no	dormant buds(0 month)	1.1929
SRR5252889	dormant buds	no	dormant buds(0 month)	3.88252
SRR5252886	dormant buds	no	dormant buds(1 months)	0.865911
SRR5252887	dormant buds	no	dormant buds(1 months)	1.30375
SRR5252884	dormant buds	no	dormant buds(2 months)	2.20456
SRR5252882	dormant buds	no	dormant buds(3 months)	2.57957
SRR5252883	dormant buds	no	dormant buds(3 months)	1.20466
SRR5252880	dormant buds	no	dormant buds(4 months)	0.858143
SRR5252881	dormant buds	no	dormant buds(4 months)	1.22465
SRR5252878	bud break	no	bud break	1.46526
SRR5252879	bud break	no	bud break	0.270803
SRR3744766	flower	no	mature	0.206004
SRR3744767	flower	no	mature	0.157806
SRR3744768	flower	no	mature	0.249523
SRR6308190	stigmas	no	open flowers	0.292103
SRR6308181	styles	no	open flowers	0.251132
SRR6308188	filaments	no	open flowers	0.754732
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.129697
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.429853
SRR6308194	sepals	no	open flowers	1.5623
SRR6308193	receptacles	no	open flowers	4.23609
SRR6308189	ovaries	no	open flowers	0.472453
SRR3384922	fruit	no	1 week after full bloom	0.574999
SRR3384921	fruit	no	2 week after full bloom	0.622401
SRR3384920	fruit	no	3 week after full bloom	4.6583
SRR3384919	fruit	no	4 week after full bloom	0.151891
SRR3384923	fruit	no	5 week after full bloom	0.770384
SRR3384918	fruit	no	6 week after full bloom	0.750397
SRR3384917	fruit	no	8 week after full bloom	0.464306
SRR3384916	fruit	no	10 week after full bloom	0.452379
SRR3384915	fruit	no	12 week after full bloom	2.31942
SRR3384914	fruit	no	14 week after full bloom	0.807513
SRR3384913	fruit	no	16 week after full bloom	0.271747
SRR3384912	fruit	no	18 week after full bloom	0.446286
SRR3384911	fruit	no	19 week after full bloom	0.305744
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	10.0312
SRR768129	whole fruit	no	35 days post anthesis	0.151941
SRR768130	whole fruit	no	60 days post anthesis	0.636858
SRR768131	whole fruit	no	87 days post anthesis	0.191747
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0.678131
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.0319173
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0.040032
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0.136458
SRR7403503	fruit	infected with penicillium expansum	mature	0.0762064
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0.257222
SRR1613974	Central seeds	no	20DAPF	0.483028
SRR1613975	Central seeds	no	20DAPF	0.303901
SRR1613976	Lateral seeds	no	20DAPF	3.25553
SRR1613977	Lateral seeds	no	20DAPF	1.72775
SRR1613978	Lateral seeds	no	20DAPF	2.34617
SRR3744786	stem	no	mature	0.0264943
SRR3744787	stem	no	mature	0
SRR3744772	stem	no	mature	0.0522916
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.567449
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.61832
SRR1089478	leaf	Virus-free	plantlets	11.9288
SRR1089477	leaf	ASGV-infected	plantlets	11.8233
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	28.0385
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.01978
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.16933
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.142839
SRR6308182	young leaf	no	immature leaves	0.767292
SRR3744769	leaf	no	mature	0.027068
SRR3744770	leaf	no	mature	0.0855351
SRR3744771	leaf	no	mature	0.0280869
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0.57862